RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 C1QTNF1Q9BXJ1 281 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 FAM96AQ9H5X1 160 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 STN1Q9H668 368 aaKnown RBP20.55■□□□□ 0.88
HPS3-206ENST00000486530 KIAA1671Q9BY89 1806 aa20.55■□□□□ 0.88
HPS3-206ENST00000486530 A0A0D9SEW6 157 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 G3V2L1 256 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 LYPLA1O75608 230 aaPredicted RBP20.54■□□□□ 0.88
HPS3-206ENST00000486530 SLC35E2BP0CK96 405 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 HLA-DPA1P20036 260 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 RAB10P61026 200 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 ABCE1P61221 599 aaKnown RBP20.54■□□□□ 0.88
HPS3-206ENST00000486530 RIPK1Q13546 671 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 LAMB3Q13751 1172 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 ITGA9Q13797 1035 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 SLC14A2Q15849 920 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 IL31Q6EBC2 164 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 C16orf59Q7L2K0 433 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 SLC41A1Q8IVJ1 513 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 TNS4Q8IZW8 715 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.54■□□□□ 0.88
HPS3-206ENST00000486530 SLC7A6OSQ96CW6 309 aaPredicted RBP20.54■□□□□ 0.88
HPS3-206ENST00000486530 IFT43Q96FT9 208 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 SPG21Q9NZD8 308 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 DNAJC16Q9Y2G8 782 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 OBSL1O75147 1896 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 MROH6A6NGR9 719 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 FCHO1O14526 889 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 BAIAP3O94812 1187 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 EPOP01588 193 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 KLKB1P03952 638 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 FGF1P05230 155 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 STMN1P16949 149 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 SAT1P21673 171 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 CRABP2P29373 138 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 RPS24P62847 133 aaKnown RBP20.54■□□□□ 0.88
HPS3-206ENST00000486530 GALNT7Q86SF2 657 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 DDX53Q86TM3 631 aaKnown RBP20.54■□□□□ 0.88
HPS3-206ENST00000486530 DDX50Q9BQ39 737 aaKnown RBP20.54■□□□□ 0.88
HPS3-206ENST00000486530 MGME1Q9BQP7 344 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 TASP1Q9H6P5 420 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 IL23AQ9NPF7 189 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 SEPT3Q9UH03 358 aa20.54■□□□□ 0.88
HPS3-206ENST00000486530 A0A1B0GVM2 712 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 ILVBLA1L0T0 632 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 TTC24A2A3L6 582 aaPredicted RBP20.53■□□□□ 0.88
HPS3-206ENST00000486530 TCAF2A6NFQ2 919 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 TMEM114B3SHH9 223 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 PRRG1O14668 218 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 MUSKO15146 869 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 PHGDHO43175 533 aaKnown RBP20.53■□□□□ 0.88
HPS3-206ENST00000486530 PTPN4P29074 926 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 OXCT1P55809 520 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 HSF5Q4G112 596 aaPredicted RBP20.53■□□□□ 0.88
HPS3-206ENST00000486530 ADGRF1Q5T601 910 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 OTOP2Q7RTS6 562 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 SETD3Q86TU7 594 aaPredicted RBP20.53■□□□□ 0.88
HPS3-206ENST00000486530 ALYREFQ86V81 257 aaKnown RBP20.53■□□□□ 0.88
HPS3-206ENST00000486530 OR7D4Q8NG98 312 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 OR13J1Q8NGT2 312 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 SORT1Q99523 831 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 KLF16Q9BXK1 252 aaPredicted RBP20.53■□□□□ 0.88
HPS3-206ENST00000486530 ACE2Q9BYF1 805 aaPredicted RBP20.53■□□□□ 0.88
HPS3-206ENST00000486530 UBA2Q9UBT2 640 aaPredicted RBP20.53■□□□□ 0.88
HPS3-206ENST00000486530 ACOT9Q9Y305 439 aa20.53■□□□□ 0.88
HPS3-206ENST00000486530 SLC7A4O43246 635 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 KDELR3O43731 214 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 CCDC22O60826 627 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 ATP6V1G2O95670 118 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 RHOCP08134 193 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 SERPINF2P08697 491 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 ELF1P32519 619 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 POU4F1Q01851 419 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 TWF1Q12792 350 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 RFTN1Q14699 578 aaPredicted RBP20.52■□□□□ 0.88
HPS3-206ENST00000486530 UBE2Q1Q7Z7E8 422 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 LMNTD2Q8IXW0 634 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 PEX13Q92968 403 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 PTCD3Q96EY7 689 aaKnown RBP20.52■□□□□ 0.88
HPS3-206ENST00000486530 NSL1Q96IY1 281 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 ELMO2Q96JJ3 720 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 NMUR2Q9GZQ4 415 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 MFSD1Q9H3U5 465 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 GKN1Q9NS71 199 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 AGO1Q9UL18 857 aaKnown RBP20.52■□□□□ 0.88
HPS3-206ENST00000486530 MAFFQ9ULX9 164 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 STK38LQ9Y2H1 464 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 PCDHB12Q9Y5F1 795 aa20.52■□□□□ 0.88
HPS3-206ENST00000486530 A0A087X1B8 175 aa20.52■□□□□ 0.87
HPS3-206ENST00000486530 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.52■□□□□ 0.87
HPS3-206ENST00000486530 C2orf78A6NCI8 922 aa20.52■□□□□ 0.87
HPS3-206ENST00000486530 TRIM13O60858 407 aa20.52■□□□□ 0.87
HPS3-206ENST00000486530 AVPR1AP37288 418 aa20.52■□□□□ 0.87
HPS3-206ENST00000486530 PRKAA2P54646 552 aa20.52■□□□□ 0.87
HPS3-206ENST00000486530 ZNF177Q13360 481 aaPredicted RBP20.52■□□□□ 0.87
HPS3-206ENST00000486530 ZYG11AQ6WRX3 759 aa20.52■□□□□ 0.87
HPS3-206ENST00000486530 MFSD6LQ8IWD5 586 aa20.52■□□□□ 0.87
HPS3-206ENST00000486530 TCEAL8Q8IYN2 117 aa20.52■□□□□ 0.87
HPS3-206ENST00000486530 OR52K2Q8NGK3 314 aa20.52■□□□□ 0.87
HPS3-206ENST00000486530 PRR11Q96HE9 360 aaPredicted RBP20.52■□□□□ 0.87
HPS3-206ENST00000486530 PSKH2Q96QS6 385 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms