RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 OR14C36Q8NHC7 312 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 ACTL9Q8TC94 416 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 GRIN3AQ8TCU5 1115 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 HTR3CQ8WXA8 447 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 SKA1Q96BD8 255 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 TOE1Q96GM8 510 aaKnown RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 FEM1CQ96JP0 617 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 OLFM3Q96PB7 478 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 LGMNQ99538 433 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 NAPGQ99747 312 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 MGME1Q9BQP7 344 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 C1QTNF7Q9BXJ2 289 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 ADGRE3Q9BY15 652 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 TPSD1Q9BZJ3 242 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 MKRN2Q9H000 416 aaKnown RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 SUV39H2Q9H5I1 410 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 PREBQ9HCU5 417 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 NT5MQ9NPB1 228 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 SEMA4GQ9NTN9 838 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 SEPT10Q9P0V9 454 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 USP36Q9P275 1121 aaKnown RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 KLHL8Q9P2G9 620 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 DNPEPQ9ULA0 475 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 PACSIN2Q9UNF0 486 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 RPL26L1Q9UNX3 145 aaKnown RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 ZNF148Q9UQR1 794 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 CHD8Q9HCK8 2581 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 CHD5Q8TDI0 1954 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TBC1D3DA0A087WVF3 549 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TBC1D3IA0A087WXS9 549 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TBC1D3EA0A087X179 549 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TBC1D3KA0A087X1G2 549 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 BCLAF3A2AJT9 711 aaKnown RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TBC1D3FA6NER0 549 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TBC1D3LB9A6J9 549 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 PGRMC1O00264 195 aaKnown RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 ENC1O14682 589 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TSPAN6O43657 245 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 OPHN1O60890 802 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 LRP3O75074 770 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 ANXA9O76027 345 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 SEMA4FO95754 770 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 CD160O95971 181 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 FGGP02679 453 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 UGT2B4P06133 528 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TBC1D3HP0C7X1 549 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 VAV1P15498 845 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 HOXD12P35452 270 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 NEK3P51956 506 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 EPHB1P54762 984 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 OTUD4Q01804 1114 aaKnown RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 SLC10A2Q12908 348 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 SGCGQ13326 291 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 PRKD1Q15139 912 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 CSRP2Q16527 193 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 CCNG2Q16589 344 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 MAP7D1Q3KQU3 841 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TEX44Q53QW1 395 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 ATXN7L2Q5T6C5 722 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 ARMC12Q5T9G4 340 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TBC1D3GQ6DHY5 549 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TBC1D3CQ6IPX1 549 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 ARHGAP36Q6ZRI8 547 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 GSTA5Q7RTV2 222 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 PID1Q7Z2X4 250 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 PRPF39Q86UA1 669 aaKnown RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 FAM124AQ86V42 546 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TBC1D3Q8IZP1 549 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 SLC35F6Q8N357 371 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 CHST14Q8NCH0 376 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 OR2T34Q8NGX1 318 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 IFT43Q96FT9 208 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 ZC3H10Q96K80 434 aaKnown RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 AGAP3Q96P47 875 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 QKIQ96PU8 341 aaKnown RBP eCLIP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 IL12RB2Q99665 862 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 SEMA3CQ99985 751 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TLR10Q9BXR5 811 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 DUSP15Q9H1R2 295 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 SLC25A51Q9H1U9 297 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 MTG2Q9H4K7 406 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 CD248Q9HCU0 757 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 VPS45Q9NRW7 570 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 C2orf42Q9NWW7 574 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 KCTD5Q9NXV2 234 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 SUSD2Q9UGT4 822 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 EVLQ9UI08 416 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 TTC7AQ9ULT0 858 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 PYCARDQ9ULZ3 195 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 SNX12Q9UMY4 172 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 CYP8B1Q9UNU6 501 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 AAR2Q9Y312 384 aaKnown RBP8.36□□□□□ -1.07
SF3A1-208ENST00000485618 SAR1BQ9Y6B6 198 aa8.36□□□□□ -1.07
SF3A1-208ENST00000485618 ATRXP46100 2492 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 IGHV1OR15-9A0A0B4J2B8 117 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 A0A1W2PP55 124 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 C16orf96A6NNT2 1141 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 KCNK1O00180 336 aa8.35□□□□□ -1.07
SF3A1-208ENST00000485618 RNF103O00237 685 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms