RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 BCAR1P56945 870 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 ADAM17P78536 824 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 SARNPP82979 210 aaKnown RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 CDK16Q00536 496 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 NKPD1Q17RQ9 610 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 SKIDA1Q1XH10 827 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 KIZQ2M2Z5 673 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 BROXQ5VW32 411 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 KIAA1614Q5VZ46 1190 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 SLC9A4Q6AI14 798 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 PGBD2Q6P3X8 592 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 OLFML1Q6UWY5 402 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 DSTYKQ6XUX3 929 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 RGS9BPQ6ZS82 235 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 FAM183BPQ6ZVS7 135 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 CDR2LQ86X02 465 aaPredicted RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 DENND1CQ8IV53 801 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 PALM2Q8IXS6 379 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 TMEM86AQ8N2M4 240 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 ARFGAP1Q8N6T3 406 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 NAT8LQ8N9F0 302 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 PCYOX1LQ8NBM8 494 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 CHST14Q8NCH0 376 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 OR6B3Q8NGW1 331 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 PPP1R35Q8TAP8 253 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 CKAP2Q8WWK9 683 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 MAML1Q92585 1016 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 CENPIQ92674 756 aaPredicted RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 ZBTB9Q96C00 473 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 FAF2Q96CS3 445 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 VWCEQ96DN2 955 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 C1GALT1C1Q96EU7 318 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 TMEM169Q96HH4 297 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 ZMAT2Q96NC0 199 aaKnown RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 TWNKQ96RR1 684 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 SMC6Q96SB8 1091 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 CYTH2Q99418 400 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 TMEM121Q9BTD3 319 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 DDX23Q9BUQ8 820 aaKnown RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 TRIM62Q9BVG3 475 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 CALN1Q9BXU9 219 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 KLC2Q9H0B6 622 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 TRIT1Q9H3H1 467 aaKnown RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 CD248Q9HCU0 757 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 KCNK9Q9NPC2 374 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 DMRT3Q9NQL9 472 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.9□□□□□ -1.14
SNX13-208ENST00000482558 EURLQ9NYK6 297 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 IFT80Q9P2H3 777 aaPredicted RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 ZMYND8Q9ULU4 1186 aaPredicted RBP7.9□□□□□ -1.14
SNX13-208ENST00000482558 RAD54BQ9Y620 910 aa7.9□□□□□ -1.14
SNX13-208ENST00000482558 SF3B1O75533 1304 aaKnown RBP eCLIP7.89□□□□□ -1.155e-6■■■■■ 63.7
SNX13-208ENST00000482558 IQANK1A0A1B0GTG1 560 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 SMIM28A0A1B0GU29 152 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 SYNDIG1LA6NDD5 238 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 B4E171 279 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 H0YHG0 523 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 XPO1O14980 1071 aaKnown RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 TM9SF1O15321 606 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 MGEA5O60502 916 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 FAM155BO75949 473 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 RECQL4O94761 1208 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 CELF2O95319 508 aaKnown RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 CBX7O95931 251 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 CSTBP04080 98 aaKnown RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 VIMP08670 466 aaKnown RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 AKR1A1P14550 325 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 TCF4P15884 667 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 PSMA3P25788 255 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 HOXC8P31273 242 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 RPL22P35268 128 aaKnown RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 BUD31P41223 144 aaPredicted RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 SLCO1A2P46721 670 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 LHX1P48742 406 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 ACTN3Q08043 901 aaPredicted RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 PDIA2Q13087 525 aaKnown RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 IFT88Q13099 833 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 DPYSL3Q14195 570 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 SPARCL1Q14515 664 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 SNX17Q15036 470 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 DPYSL2Q16555 572 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 CCDC14Q49A88 953 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 TTC31Q49AM3 519 aaPredicted RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 SLC45A4Q5BKX6 768 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 ANKRD20A8PQ5CZ79 823 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 TMEM63BQ5T3F8 832 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 GJC2Q5T442 439 aaPredicted RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 RFX8Q6ZV50 586 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 CYS1Q717R9 158 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 RPAINQ86UA6 219 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 MTDHQ86UE4 582 aaKnown RBP7.89□□□□□ -1.15
SNX13-208ENST00000482558 TRABD2AQ86V40 505 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 C10orf67Q8IYJ2 551 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 ZBED8Q8IZ13 594 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 MFSD4AQ8N468 514 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 C7orf31Q8N865 590 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 MCUQ8NE86 351 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 NPLOC4Q8TAT6 608 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 UBA3Q8TBC4 463 aa7.89□□□□□ -1.15
SNX13-208ENST00000482558 FAM172AQ8WUF8 416 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms