RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 GPR34Q9UPC5 381 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 CNTN6Q9UQ52 1028 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 COQ6Q9Y2Z9 468 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 LOXL2Q9Y4K0 774 aa6.78□□□□□ -1.32
RTFDC1-206ENST00000477485 ARHGEF17Q96PE2 2063 aaPredicted RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 SDK2Q58EX2 2172 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 PRAMEF33A0A0G2JMD5 474 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 ILVBLA1L0T0 632 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 BECN2A8MW95 431 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 TMX2-CTNND1H3BSU7 103 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 LZTS3O60299 673 aaPredicted RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 PRAMEF10O60809 474 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 PPFIA2O75334 1257 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 FGFR1OPO95684 399 aaKnown RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 F9P00740 461 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 PCCBP05166 539 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 ALPIP09923 528 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 PNMA6AP0CW24 399 aaPredicted RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 SLC9A1P19634 815 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 HTR1BP28222 390 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 ACVRL1P37023 503 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 PFN3P60673 137 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 SKOR1P84550 965 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 ATP11AP98196 1134 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 RAD51Q06609 339 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 SLC20A2Q08357 652 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 EIF3IQ13347 325 aaKnown RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 BIRC2Q13490 618 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 IRF4Q15306 451 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 CDO1Q16878 200 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 LINC00303Q3SY05 128 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 C5orf22Q49AR2 442 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 MAP9Q49MG5 647 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 PTPN20Q4JDL3 420 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 C2CD6Q53TS8 623 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 CFAP58Q5T655 872 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 OTUD1Q5VV17 481 aaPredicted RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 GDPD4Q6W3E5 623 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 ZNF783Q6ZMS7 281 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 ZNF574Q6ZN55 896 aaPredicted RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 GBP6Q6ZN66 633 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 SLC47A2Q86VL8 602 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 ZSCAN30Q86W11 494 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 ZFAND4Q86XD8 727 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 GKN2Q86XP6 184 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 PTRH1Q86Y79 214 aaKnown RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 FSTL5Q8N475 847 aaPredicted RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 NETO2Q8NC67 525 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 FAM81BQ96LP2 452 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 CFAP57Q96MR6 1250 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 LENG8Q96PV6 779 aaPredicted RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 NPY6RQ99463 290 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 C1QTNF2Q9BXJ5 285 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 CLPBQ9H078 707 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 LRRN3Q9H3W5 708 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 SUDS3Q9H7L9 328 aaPredicted RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 MBNL1Q9NR56 388 aaKnown RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 RRN3Q9NYV6 651 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 APEX2Q9UBZ4 518 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 KLQ9UEF7 1012 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 SEPT3Q9UH03 358 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 RABGEF1Q9UJ41 708 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 MOSPD1Q9UJG1 213 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 PNMA8BQ9ULN7 279 aaPredicted RBP6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 PCDHGC3Q9UN70 934 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 PCDHGA4Q9Y5G9 962 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 PTPN13Q12923 2485 aa6.77□□□□□ -1.33
RTFDC1-206ENST00000477485 DRGXA6NNA5 263 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 B4DGG1 531 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 PPP1R3GB7ZBB8 358 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 I6L893 689 aaPredicted RBP6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 PES1O00541 588 aaKnown RBP6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 NTN3O00634 580 aaPredicted RBP6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 TERTO14746 1132 aaKnown RBP6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 BUB1O43683 1085 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 ZNF821O75541 412 aaPredicted RBP6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 ZMPSTE24O75844 475 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 RASGRP1O95267 797 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 IGSF6O95976 241 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 ITGB2P05107 769 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 SFTPCP11686 197 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 ITIH2P19823 946 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 ETFBP38117 255 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 MTIF2P46199 727 aaKnown RBP6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 HK3P52790 923 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 GEMIN4P57678 1058 aaKnown RBP6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 RHOAP61586 193 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 YPEL5P62699 121 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 TLE1Q04724 770 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 RAPGEF1Q13905 1077 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 ARHGEF7Q14155 803 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 LRRC14Q15048 493 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 TPD52L1Q16890 204 aaPredicted RBP6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 EXOC3L4Q17RC7 722 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 ALG11Q2TAA5 492 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 SLC25A52Q3SY17 297 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 AMZ1Q400G9 498 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 COLEC12Q5KU26 742 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 TAF3Q5VWG9 929 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 TAF8Q7Z7C8 310 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms