RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 DGKKQ5KSL6 1271 aa29.13■■■□□ 2.25
VEGFA-211ENST00000476772 SPANXN3Q5MJ09 141 aa29.13■■■□□ 2.25
VEGFA-211ENST00000476772 AGBL2Q5U5Z8 902 aa29.13■■■□□ 2.25
VEGFA-211ENST00000476772 SRLQ86TD4 932 aa29.13■■■□□ 2.25
VEGFA-211ENST00000476772 TMEM135Q86UB9 458 aa29.13■■■□□ 2.25
VEGFA-211ENST00000476772 MYLIPQ8WY64 445 aa29.13■■■□□ 2.25
VEGFA-211ENST00000476772 PGM2Q96G03 612 aa29.13■■■□□ 2.25
VEGFA-211ENST00000476772 TDRD1Q9BXT4 1180 aaKnown RBP29.13■■■□□ 2.25
VEGFA-211ENST00000476772 TNKS2Q9H2K2 1166 aa29.13■■■□□ 2.25
VEGFA-211ENST00000476772 CHKBQ9Y259 395 aa29.13■■■□□ 2.25
VEGFA-211ENST00000476772 PCDHGC4Q9Y5F7 938 aa29.13■■■□□ 2.25
VEGFA-211ENST00000476772 ANKRD36A6QL64 1941 aa29.13■■■□□ 2.25
VEGFA-211ENST00000476772 H3BQ06 376 aaPredicted RBP29.12■■■□□ 2.25
VEGFA-211ENST00000476772 POLR2EP19388 210 aaKnown RBP29.12■■■□□ 2.25
VEGFA-211ENST00000476772 HLA-DPA1P20036 260 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 UNC5BQ8IZJ1 945 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 SUSD6Q92537 303 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 TTC17Q96AE7 1141 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 RPP25Q9BUL9 199 aaKnown RBP29.12■■■□□ 2.25
VEGFA-211ENST00000476772 KIFC1Q9BW19 673 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 MOCS1Q9NZB8 636 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 FETUBQ9UGM5 382 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 RAI2Q9Y5P3 530 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 CDH16O75309 829 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 USP1O94782 785 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 SP100P23497 879 aaPredicted RBP29.12■■■□□ 2.25
VEGFA-211ENST00000476772 SLC6A11P48066 632 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 ANKRD20A4Q4UJ75 823 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 RALGPS1Q5JS13 557 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 C22orf39Q6P5X5 142 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 PPHLN1Q8NEY8 458 aaKnown RBP29.12■■■□□ 2.25
VEGFA-211ENST00000476772 OR6K2Q8NGY2 324 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 MFSD3Q96ES6 412 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 PAFAH2Q99487 392 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 SMYD2Q9NRG4 433 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 EURLQ9NYK6 297 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 SLC24A2Q9UI40 661 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 SLC27A6Q9Y2P4 619 aa29.12■■■□□ 2.25
VEGFA-211ENST00000476772 HMGB1P1B2RPK0 211 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-211ENST00000476772 ALDH1A2O94788 518 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 NDST3O95803 873 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 FGF1P05230 155 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 AP1S1P61966 158 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 TRAF2Q12933 501 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 MSLNQ13421 630 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-211ENST00000476772 RUNX3Q13761 415 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 PKN3Q6P5Z2 889 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 TDRPQ86YL5 185 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 CPA6Q8N4T0 437 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 TTC8Q8TAM2 541 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 PKNOX2Q96KN3 472 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 ZNF778Q96MU6 729 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 PPCSQ9HAB8 311 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 VPS18Q9P253 973 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 TBK1Q9UHD2 729 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 EVLQ9UI08 416 aaPredicted RBP29.11■■■□□ 2.25
VEGFA-211ENST00000476772 SLCO3A1Q9UIG8 710 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 NOVA2Q9UNW9 492 aaKnown RBP29.11■■■□□ 2.25
VEGFA-211ENST00000476772 ERVW-1Q9UQF0 538 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 TCAF1Q9Y4C2 921 aa29.11■■■□□ 2.25
VEGFA-211ENST00000476772 CCDC78A2IDD5 438 aa29.1■■■□□ 2.25
VEGFA-211ENST00000476772 CXorf49A8MYA2 514 aaPredicted RBP29.1■■■□□ 2.25
VEGFA-211ENST00000476772 ECI2O75521 394 aa29.1■■■□□ 2.25
VEGFA-211ENST00000476772 IGSF6O95976 241 aa29.1■■■□□ 2.25
VEGFA-211ENST00000476772 NMBRP28336 390 aa29.1■■■□□ 2.25
VEGFA-211ENST00000476772 MESP2Q0VG99 397 aa29.1■■■□□ 2.25
VEGFA-211ENST00000476772 RIBC1Q8N443 379 aaPredicted RBP29.1■■■□□ 2.25
VEGFA-211ENST00000476772 WFIKKN2Q8TEU8 576 aa29.1■■■□□ 2.25
VEGFA-211ENST00000476772 CYB5D2Q8WUJ1 264 aa29.1■■■□□ 2.25
VEGFA-211ENST00000476772 SORCS1Q8WY21 1168 aa29.1■■■□□ 2.25
VEGFA-211ENST00000476772 ISG20Q96AZ6 181 aaKnown RBP29.1■■■□□ 2.25
VEGFA-211ENST00000476772 GTSE1Q9NYZ3 720 aa29.1■■■□□ 2.25
VEGFA-211ENST00000476772 LGALS13Q9UHV8 139 aa29.1■■■□□ 2.25
VEGFA-211ENST00000476772 ARIH1Q9Y4X5 557 aaPredicted RBP29.1■■■□□ 2.25
VEGFA-211ENST00000476772 BRWD1Q9NSI6 2320 aa29.1■■■□□ 2.25
VEGFA-211ENST00000476772 XIRP2A4UGR9 3374 aa29.1■■■□□ 2.25
VEGFA-211ENST00000476772 ZCWPW2A0A1B0GU75 182 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 FAM159BA6NKW6 160 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 PRLP01236 227 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 GDI1P31150 447 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 CSNK1DP48730 415 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 SEPT6Q14141 434 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 CYS1Q717R9 158 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 SERBP1Q8NC51 408 aaKnown RBP eCLIP29.09■■■□□ 2.256e-6■■■■■ 47.7
VEGFA-211ENST00000476772 OR2AP1Q8NGE2 309 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 PTCD2Q8WV60 388 aaKnown RBP29.09■■■□□ 2.25
VEGFA-211ENST00000476772 TLCD1Q96CP7 247 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 DHRS4Q9BTZ2 278 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 CIPCQ9C0C6 399 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 IL1RAPL1Q9NZN1 696 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 EPS15L1Q9UBC2 864 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 FAM169AQ9Y6X4 670 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 KIAA1549LQ6ZVL6 1849 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 PDHA1P08559 390 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 ADRA1DP25100 572 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 NR1H3Q13133 447 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 TMED2Q15363 201 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 ACCSLQ4AC99 568 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 GRAMD4Q6IC98 578 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 MTSS1LQ765P7 747 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms