RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 SNX29P2Q8IUI4 249 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 OFCC1Q8IZS5 231 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 PAF1Q8N7H5 531 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 SNX31Q8N9S9 440 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 OR2T34Q8NGX1 318 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 OR2T3Q8NH03 318 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 ANGPTL6Q8NI99 470 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 CYGBQ8WWM9 190 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 TFAP2BQ92481 460 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 TBCBQ99426 244 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 POLMQ9NP87 494 aaPredicted RBP10.66□□□□□ -0.7
ABCF1-205ENST00000475993 AGPAT4Q9NRZ5 378 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.66□□□□□ -0.7
ABCF1-205ENST00000475993 OXSMQ9NWU1 459 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 GDAP2Q9NXN4 497 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 CACNA2D2Q9NY47 1150 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 SLCO1B7G3V0H7 640 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 hCG_2039718K7EN88 272 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 NRP1O14786 923 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 IDH3BO43837 385 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 ATG7O95352 703 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 JUNP05412 331 aaKnown RBP10.66□□□□□ -0.7
ABCF1-205ENST00000475993 NCAM1P13591 858 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 CFL1P23528 166 aaKnown RBP10.66□□□□□ -0.7
ABCF1-205ENST00000475993 ATICP31939 592 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 CAPGP40121 348 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 YAP1P46937 504 aaKnown RBP10.66□□□□□ -0.7
ABCF1-205ENST00000475993 RAD23AP54725 363 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 BFSP2Q13515 415 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 GNA13Q14344 377 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 KIZQ2M2Z5 673 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 DALRD3Q5D0E6 543 aaKnown RBP10.66□□□□□ -0.7
ABCF1-205ENST00000475993 XKR9Q5GH70 373 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 CCNYL2Q5T2Q4 361 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 XAF1Q6GPH4 301 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 GK5Q6ZS86 529 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 USP51Q70EK9 711 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 SPRED1Q7Z699 444 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 CLEC14AQ86T13 490 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 DHFR2Q86XF0 187 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 SAMD14Q8IZD0 417 aaPredicted RBP10.66□□□□□ -0.7
ABCF1-205ENST00000475993 BPIFB6Q8NFQ5 453 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 SDCCAG3Q96C92 435 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 C9orf16Q9BUW7 83 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 RSPH9Q9H1X1 276 aaPredicted RBP10.66□□□□□ -0.7
ABCF1-205ENST00000475993 ATP13A3Q9H7F0 1226 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 MAGEE1Q9HCI5 957 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 PKD2L2Q9NZM6 624 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 IFT80Q9P2H3 777 aaPredicted RBP10.66□□□□□ -0.7
ABCF1-205ENST00000475993 ZDHHC2Q9UIJ5 367 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 ACOX3O15254 700 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 NUAK1O60285 661 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 ZNF254O75437 659 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 RASAL1O95294 804 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 M6PRP20645 277 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 TGM2P21980 687 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 EEF1DP29692 281 aaKnown RBP10.65□□□□□ -0.7
ABCF1-205ENST00000475993 PRKAA1Q13131 559 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 CYBRD1Q53TN4 286 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 ARL13AQ5H913 290 aaPredicted RBP10.65□□□□□ -0.7
ABCF1-205ENST00000475993 GLRA4Q5JXX5 417 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 IQSEC1Q6DN90 963 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 CCDC28AQ8IWP9 274 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 DACT3Q96B18 629 aaPredicted RBP10.65□□□□□ -0.7
ABCF1-205ENST00000475993 MOCOSQ96EN8 888 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 GIMAP5Q96F15 307 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 TXNDC15Q96J42 360 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 LHPPQ9H008 270 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 UPF3AQ9H1J1 476 aaKnown RBP10.65□□□□□ -0.7
ABCF1-205ENST00000475993 SP140LQ9H930 580 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 BTG4Q9NY30 223 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 STMN3Q9NZ72 180 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 TMEM181Q9P2C4 612 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 CYTH4Q9UIA0 394 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 SIPA1L1O43166 1804 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 RNF103-CHMP3A0A140T963 221 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 PIGNO95427 931 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 GP5P40197 560 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 GARSP41250 739 aaKnown RBP10.65□□□□□ -0.7
ABCF1-205ENST00000475993 CCR10P46092 362 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 ACOT2P49753 483 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 GALNT1Q10472 559 aaPredicted RBP10.65□□□□□ -0.7
ABCF1-205ENST00000475993 AQP6Q13520 282 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 DENND1BQ6P3S1 775 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 TRMT1LQ7Z2T5 733 aaKnown RBP10.65□□□□□ -0.7
ABCF1-205ENST00000475993 TFAP2DQ7Z6R9 452 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 AKAP14Q86UN6 197 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 DHRSXQ8N5I4 330 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 ANKRD49Q8WVL7 239 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 S100ZQ8WXG8 99 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 FKBP10Q96AY3 582 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 CITED4Q96RK1 184 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 IER2Q9BTL4 223 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 ANKEF1Q9NU02 776 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 VANGL2Q9ULK5 521 aa10.65□□□□□ -0.7
ABCF1-205ENST00000475993 SLC22A1O15245 554 aa10.64□□□□□ -0.71
ABCF1-205ENST00000475993 PRLP01236 227 aa10.64□□□□□ -0.71
ABCF1-205ENST00000475993 GH2P01242 217 aa10.64□□□□□ -0.71
ABCF1-205ENST00000475993 ATP6V1B2P21281 511 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms