RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 LINC00523Q86TU6 105 aa15.31■□□□□ 0.04
MCF2L-224ENST00000475524 HOOK3Q86VS8 718 aa15.31■□□□□ 0.04
MCF2L-224ENST00000475524 RYBPQ8N488 228 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-224ENST00000475524 CAMKK1Q8N5S9 505 aa15.31■□□□□ 0.04
MCF2L-224ENST00000475524 ZNF366Q8N895 744 aa15.31■□□□□ 0.04
MCF2L-224ENST00000475524 CHST14Q8NCH0 376 aa15.31■□□□□ 0.04
MCF2L-224ENST00000475524 FLCNQ8NFG4 579 aa15.31■□□□□ 0.04
MCF2L-224ENST00000475524 RUBCNQ92622 972 aa15.31■□□□□ 0.04
MCF2L-224ENST00000475524 OXNAD1Q96HP4 312 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-224ENST00000475524 RBM15Q96T37 977 aaKnown RBP eCLIP15.31■□□□□ 0.04
MCF2L-224ENST00000475524 GORASP1Q9BQQ3 440 aa15.31■□□□□ 0.04
MCF2L-224ENST00000475524 TDRD1Q9BXT4 1180 aaKnown RBP15.31■□□□□ 0.04
MCF2L-224ENST00000475524 FRMD8Q9BZ67 464 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-224ENST00000475524 SUV39H2Q9H5I1 410 aa15.31■□□□□ 0.04
MCF2L-224ENST00000475524 ZDHHC6Q9H6R6 413 aa15.31■□□□□ 0.04
MCF2L-224ENST00000475524 ETNK1Q9HBU6 452 aa15.31■□□□□ 0.04
MCF2L-224ENST00000475524 LOC285095A0A1B0GVY8 99 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 BHMG1C9JSJ3 638 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-224ENST00000475524 DNALI1O14645 258 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-224ENST00000475524 BNIP3LO60238 219 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 LEFTY1O75610 366 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 ALDH1A2O94788 518 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 CTSLP07711 333 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 HLA-DPA1P20036 260 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 C5AR1P21730 350 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 HOXA6P31267 233 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 ADCY8P40145 1251 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 WASP42768 502 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 TNNT3P45378 269 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-224ENST00000475524 WNT3AP56704 352 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 POLR2LP62875 67 aaKnown RBP15.3■□□□□ 0.04
MCF2L-224ENST00000475524 SATB1Q01826 763 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 CST6Q15828 149 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 ARMC12Q5T9G4 340 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 DUPD1Q68J44 220 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 KIAA1211LQ6NV74 962 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 TMEM92Q6UXU6 159 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 NDUFAF2Q8N183 169 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 SPATA22Q8NHS9 363 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 PIP4K2CQ8TBX8 421 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 FAM131CQ96AQ9 280 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 SNF8Q96H20 258 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 TRIB3Q96RU7 358 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 SRPK1Q96SB4 655 aaKnown RBP15.3■□□□□ 0.04
MCF2L-224ENST00000475524 LRRC1Q9BTT6 524 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 MLPHQ9BV36 600 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-224ENST00000475524 ADGRE3Q9BY15 652 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 MTG2Q9H4K7 406 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 ARNT2Q9HBZ2 717 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 ZDHHC4Q9NPG8 344 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 RRAGDQ9NQL2 400 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-224ENST00000475524 WHRNQ9P202 907 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 TPX2Q9ULW0 747 aaKnown RBP15.3■□□□□ 0.04
MCF2L-224ENST00000475524 SHOC2Q9UQ13 582 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 PPIL1Q9Y3C6 166 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 PLXND1Q9Y4D7 1925 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 RAI2Q9Y5P3 530 aa15.3■□□□□ 0.04
MCF2L-224ENST00000475524 E7EVH7 732 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 SEC31AO94979 1220 aaKnown RBP15.29■□□□□ 0.04
MCF2L-224ENST00000475524 PGLSO95336 258 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 NDST3O95803 873 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 MT-CYBP00156 380 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-224ENST00000475524 UGT2B4P06133 528 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 ITIH2P19823 946 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 COL9A1P20849 921 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 ADRA1AP35348 466 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 GRIA4P48058 902 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 RPS14P62263 151 aaKnown RBP15.29■□□□□ 0.04
MCF2L-224ENST00000475524 BASP1P80723 227 aaKnown RBP15.29■□□□□ 0.04
MCF2L-224ENST00000475524 SARNPP82979 210 aaKnown RBP15.29■□□□□ 0.04
MCF2L-224ENST00000475524 CAV1Q03135 178 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 CDK18Q07002 472 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 TRAF2Q12933 501 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 IHHQ14623 411 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 KCNJ11Q14654 390 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 MORF4L2Q15014 288 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 TRIP13Q15645 432 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-224ENST00000475524 TTC31Q49AM3 519 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-224ENST00000475524 ARSIQ5FYB1 569 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 RANBP10Q6VN20 620 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 USP30Q70CQ3 517 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 KBTBD6Q86V97 674 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 RASSF3Q86WH2 238 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 TMPRSS6Q8IU80 811 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 PPIL6Q8IXY8 311 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 FBXL6Q8N531 539 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 MCUQ8NE86 351 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 OR6K2Q8NGY2 324 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 GRIN3AQ8TCU5 1115 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 PRCCQ92733 491 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-224ENST00000475524 RAB7BQ96AH8 199 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 IFT43Q96FT9 208 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 MRGPRX2Q96LB1 330 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 MRGPRX1Q96LB2 322 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 TRIM51Q9BSJ1 452 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 FSD1LQ9BXM9 530 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 HDAC8Q9BY41 377 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 PHTF1Q9UMS5 762 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 BDP1A6H8Y1 2624 aa15.29■□□□□ 0.04
MCF2L-224ENST00000475524 CCDC163A0A0D9SF12 145 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms