RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 A0A1W2PQ27 194 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 A0A1W2PQ64 194 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 A0A1W2PQM1 296 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CLEC18AA5D8T8 446 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 DRGXA6NNA5 263 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 TMX2-CTNND1H3BSU7 103 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 AREL1O15033 823 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 THAP12O43422 761 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 MED7O43513 233 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 TSPAN6O43657 245 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 PPFIA2O75334 1257 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 DAB1O75553 588 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 ZMPSTE24O75844 475 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 ZNF202O95125 648 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 ADCY5O95622 1261 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 ANXA6P08133 673 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 JMJD7P0C870 316 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 GNA15P30679 374 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CCKBRP32239 447 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CCNHP51946 323 aaPredicted RBP5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 THOP1P52888 689 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CYP4F2P78329 520 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CCL7P80098 99 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CETN1Q12798 172 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 NME3Q13232 169 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 SGCGQ13326 291 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 PTK2BQ14289 1009 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CLCA4Q14CN2 919 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 EFHC1Q5JVL4 640 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 MANEAQ5SRI9 462 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 ZNF658Q5TYW1 1059 aaPredicted RBP5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 ESRP1Q6NXG1 681 aaKnown RBP5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 OLFML1Q6UWY5 402 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CLEC18BQ6UXF7 455 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 TREML4Q6UXN2 200 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 MACC1Q6ZN28 852 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 FAM183BPQ6ZVS7 135 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 SLC26A9Q7LBE3 791 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 DTX1Q86Y01 620 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 SDR16C5Q8N3Y7 309 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 WDTC1Q8N5D0 677 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 ARL10Q8N8L6 244 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CLEC18CQ8NCF0 446 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 OR7D4Q8NG98 312 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 PCDH19Q8TAB3 1148 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 SPATA20Q8TB22 786 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 SNX21Q969T3 373 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 RAB7BQ96AH8 199 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CCDC74AQ96AQ1 378 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CENPTQ96BT3 561 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CEP63Q96MT8 703 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 GFM1Q96RP9 751 aaKnown RBP5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 HEPHQ9BQS7 1158 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 FUCA2Q9BTY2 467 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 CPEB1Q9BZB8 566 aaKnown RBP5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 SLC13A1Q9BZW2 595 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 TM6SF2Q9BZW4 377 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 STRADBQ9C0K7 418 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 SLC25A18Q9H1K4 315 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 PIGVQ9NUD9 493 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 RMND1Q9NWS8 449 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 GEMIN8Q9NWZ8 242 aaKnown RBP5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 ARHGEF38Q9NXL2 777 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 MPP6Q9NZW5 540 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 GMPR2Q9P2T1 348 aaKnown RBP5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 ZNF212Q9UDV6 495 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 PISDQ9UG56 409 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 LOXL2Q9Y4K0 774 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 SNX10Q9Y5X0 201 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 FBN2P35556 2912 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 OTOGQ6ZRI0 2925 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 ADGRG4Q8IZF6 3080 aa5.21□□□□□ -1.58
SNRNP40-204ENST00000474025 UNC13CQ8NB66 2214 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 CSMD2Q7Z408 3487 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 TACC2O95359 2948 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 PRAMEF33A0A0G2JMD5 474 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 A0A1W2PQC6 194 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ILVBLA1L0T0 632 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 C16orf96A6NNT2 1141 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 BECN2A8MW95 431 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 C9orf172C9J069 976 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 J3QL48 77 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 M0QYT0 321 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 NEMP1O14524 444 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 PRAMEF10O60809 474 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 CD160O95971 181 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ERBB2P04626 1255 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 RPLP0P05388 317 aaKnown RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 TFE3P19532 575 aaPredicted RBP5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ITIH1P19827 911 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 CR2P20023 1033 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 OR1E1P30953 314 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 GKP32189 559 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 NOS2P35228 1153 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 ETV5P41161 510 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 CXCR3P49682 368 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 DNA2P51530 1060 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 HK3P52790 923 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 YPEL5P62699 121 aa5.2□□□□□ -1.58
SNRNP40-204ENST00000474025 KRT85P78386 507 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms