RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 GALNT7Q86SF2 657 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 CLEC14AQ86T13 490 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 ZC3HC1Q86WB0 502 aaKnown RBP7.72□□□□□ -1.17
CCDC171-205ENST00000472806 ZNF280BQ86YH2 543 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 C10orf107Q8IVU9 208 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 TP53INP2Q8IXH6 220 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 UNC5BQ8IZJ1 945 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 TEX9Q8N6V9 391 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 CNTD1Q8N815 330 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 NETO2Q8NC67 525 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 FAM13CQ8NE31 585 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 ZSCAN18Q8TBC5 510 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-205ENST00000472806 AGAP11Q8TF27 550 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 SCG3Q8WXD2 468 aaKnown RBP7.72□□□□□ -1.17
CCDC171-205ENST00000472806 OVCA2Q8WZ82 227 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 PEX13Q92968 403 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 CMTM5Q96DZ9 223 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 CCDC126Q96EE4 140 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 MFSD3Q96ES6 412 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 ZNF599Q96NL3 588 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 SUV39H2Q9H5I1 410 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 TASP1Q9H6P5 420 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 DCLRE1BQ9H816 532 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 EBF2Q9HAK2 575 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 RNPEPL1Q9HAU8 725 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 NMUR1Q9HB89 426 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 ARNT2Q9HBZ2 717 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 TRPC7Q9HCX4 862 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 PRDM5Q9NQX1 630 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-205ENST00000472806 ARL8BQ9NVJ2 186 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 TMEM216Q9P0N5 145 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 GMIPQ9P107 970 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 STOML1Q9UBI4 398 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 VTI1BQ9UEU0 232 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 HCN2Q9UL51 889 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 EMCNQ9ULC0 261 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 SLC39A10Q9ULF5 831 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 PHF24Q9UPV7 400 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-205ENST00000472806 PRG3Q9Y2Y8 225 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-205ENST00000472806 ACOT9Q9Y305 439 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 PSAT1Q9Y617 370 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 FRMPD3Q5JV73 1810 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 NLRC5Q86WI3 1866 aa7.72□□□□□ -1.17
CCDC171-205ENST00000472806 PLXNA3P51805 1871 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 IGLV3-10A0A075B6K4 115 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 DRGXA6NNA5 263 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 CAPN14A8MX76 684 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 F8W8V4 182 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 SLC22A2O15244 555 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 GSC2O15499 205 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 MSI1O43347 362 aaKnown RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 RAMP2O60895 175 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 LUC7L3O95232 432 aaKnown RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 HLA-DQB2P05538 268 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 OR4Q2P0C623 313 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 KITP10721 976 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 HAPLN1P10915 354 aaPredicted RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 TPH1P17752 444 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 NMBRP28336 390 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 MSX1P28360 303 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 PGM1P36871 562 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 PBX3P40426 434 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 TUFMP49411 452 aaKnown RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 SERPINH1P50454 418 aaKnown RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 CLCN5P51795 746 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 CCNG1P51959 295 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 RAB10P61026 200 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 IRX4P78413 519 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 CTBSQ01459 385 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 ITKQ08881 620 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 EFEMP1Q12805 493 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 PRKAA1Q13131 559 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 ITGA9Q13797 1035 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 BTG3Q14201 252 aaPredicted RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 POU6F1Q14863 301 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 POLD3Q15054 466 aaPredicted RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 E2F5Q15329 346 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 SLC14A2Q15849 920 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 CCDC6Q16204 474 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 DDR2Q16832 855 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 MGAT5BQ3V5L5 792 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 MS4A13Q5J8X5 152 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 C10orf120Q5SQS8 335 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 KLC3Q6P597 504 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 RANBP10Q6VN20 620 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 SETD3Q86TU7 594 aaPredicted RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 RTN4RL1Q86UN2 441 aaPredicted RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 ZNF354CQ86Y25 554 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 NPAS4Q8IUM7 802 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 TEX26Q8N6G2 289 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 ENDOVQ8N8Q3 282 aaKnown RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 C2CD4AQ8NCU7 369 aaPredicted RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 TTC8Q8TAM2 541 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 PDCD6IPQ8WUM4 868 aaKnown RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 IMP4Q96G21 291 aaKnown RBP7.71□□□□□ -1.18
CCDC171-205ENST00000472806 ABHD17AQ96GS6 310 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 SCYL1Q96KG9 808 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 NUDCD1Q96RS6 583 aa7.71□□□□□ -1.18
CCDC171-205ENST00000472806 AGAP2Q99490 1192 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms