RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ZNF570Q96NI8 536 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 FCRL3Q96P31 734 aaPredicted RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 IL12RB2Q99665 862 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 ADAM2Q99965 735 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 APOL2Q9BQE5 337 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 OSBPL1AQ9BXW6 950 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 EML4Q9HC35 981 aaKnown RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 MRPL40Q9NQ50 206 aaKnown RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 TCF7L2Q9NQB0 619 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 CHRAC1Q9NRG0 131 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 VPS45Q9NRW7 570 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 SLC17A6Q9P2U8 582 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 NKX1-2Q9UD57 310 aaPredicted RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 PADI3Q9ULW8 664 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 MAGED2Q9UNF1 606 aaPredicted RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 CDYLQ9Y232 598 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 TCAF1Q9Y4C2 921 aa8.09□□□□□ -1.11
SMC4-212ENST00000470240 ZNF638Q14966 1978 aaKnown RBP8.09□□□□□ -1.11
SMC4-212ENST00000470240 WASH4PA8MWX3 477 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 E9PAM4 449 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 HDAC3O15379 428 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 ITM2AO43736 263 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 CACNG3O60359 315 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 PAGE1O75459 146 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 ARHGEF15O94989 841 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 PGK1P00558 417 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 IGLV3-25P01717 112 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 SAT1P21673 171 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 YY1P25490 414 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 NMBRP28336 390 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 CD68P34810 354 aaPredicted RBP8.08□□□□□ -1.12
SMC4-212ENST00000470240 BRCC3P46736 316 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 IDH3AP50213 366 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 TUBP50607 506 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 RPL14P50914 215 aaKnown RBP8.08□□□□□ -1.12
SMC4-212ENST00000470240 CLCN5P51795 746 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 NDST2P52849 883 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 ACTR3P61158 418 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 NKX3-2P78367 333 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 DSG1Q02413 1049 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 ITKQ08881 620 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 GRM3Q14832 879 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 POU6F1Q14863 301 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 MAPRE2Q15555 327 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 SMAD1Q15797 465 aaKnown RBP8.08□□□□□ -1.12
SMC4-212ENST00000470240 GSTA3Q16772 222 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 FAM83EQ2M2I3 478 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 PAN2Q504Q3 1202 aaKnown RBP8.08□□□□□ -1.12
SMC4-212ENST00000470240 ACSBG2Q5FVE4 666 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 PPM1JQ5JR12 505 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 RABGAP1LQ5R372 815 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 AGAP9Q5VTM2 703 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 LRRC8EQ6NSJ5 796 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 FAM43BQ6ZT52 329 aaPredicted RBP8.08□□□□□ -1.12
SMC4-212ENST00000470240 BHLHA9Q7RTU4 235 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 CLEC14AQ86T13 490 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 MON1AQ86VX9 555 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 SLC22A9Q8IVM8 553 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 KLHDC8BQ8IXV7 354 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 NETO2Q8NC67 525 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 C3orf58Q8NDZ4 430 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 PDCD6IPQ8WUM4 868 aaKnown RBP8.08□□□□□ -1.12
SMC4-212ENST00000470240 FATE1Q969F0 183 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 PRR11Q96HE9 360 aaPredicted RBP8.08□□□□□ -1.12
SMC4-212ENST00000470240 AGAP2Q99490 1192 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 EBF4Q9BQW3 602 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 RTKNQ9BST9 563 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 CCDC28BQ9BUN5 200 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.08□□□□□ -1.121e-147■■■■■ 345.5
SMC4-212ENST00000470240 MRPL46Q9H2W6 279 aaKnown RBP8.08□□□□□ -1.12
SMC4-212ENST00000470240 RRAGCQ9HB90 399 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 TRPC7Q9HCX4 862 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 NDFIP2Q9NV92 336 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 RBM22Q9NW64 420 aaKnown RBP eCLIP8.08□□□□□ -1.125e-24■■■■■ 66.5
SMC4-212ENST00000470240 OXSMQ9NWU1 459 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 MIOSQ9NXC5 875 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 ABI2Q9NYB9 513 aaPredicted RBP8.08□□□□□ -1.12
SMC4-212ENST00000470240 UBP1Q9NZI7 540 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 NCKIPSDQ9NZQ3 722 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 HACD3Q9P035 362 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 CACNG4Q9UBN1 327 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 SCOCQ9UIL1 159 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 PRPF19Q9UMS4 504 aaKnown RBP8.08□□□□□ -1.12
SMC4-212ENST00000470240 SCML2Q9UQR0 700 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 TLR6Q9Y2C9 796 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 PCDHB5Q9Y5E4 795 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 SNX10Q9Y5X0 201 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 DOCK3Q8IZD9 2030 aa8.08□□□□□ -1.12
SMC4-212ENST00000470240 FAM95CA0A1B0GW59 222 aa8.07□□□□□ -1.12
SMC4-212ENST00000470240 MYADML2A6NDP7 307 aa8.07□□□□□ -1.12
SMC4-212ENST00000470240 OR6C75A6NL08 312 aa8.07□□□□□ -1.12
SMC4-212ENST00000470240 MEIS3P2A8K0S8 358 aa8.07□□□□□ -1.12
SMC4-212ENST00000470240 TMEM189-UBE2V1I3L0A0 370 aa8.07□□□□□ -1.12
SMC4-212ENST00000470240 INPPL1O15357 1258 aa8.07□□□□□ -1.12
SMC4-212ENST00000470240 NPHS1O60500 1241 aa8.07□□□□□ -1.12
SMC4-212ENST00000470240 CCNT2O60583 730 aaKnown RBP8.07□□□□□ -1.12
SMC4-212ENST00000470240 MAFKO60675 156 aa8.07□□□□□ -1.12
SMC4-212ENST00000470240 PMPCBO75439 489 aa8.07□□□□□ -1.12
SMC4-212ENST00000470240 RTN3O95197 1032 aaPredicted RBP8.07□□□□□ -1.12
SMC4-212ENST00000470240 VAPBO95292 243 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms