RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 DECR2Q9NUI1 292 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 ANKRD10Q9NXR5 420 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 ZNF70Q9UC06 446 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 INTS6Q9UL03 887 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 FAM96BQ9Y3D0 163 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 AP3D1O14617 1153 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 ZC3H11AO75152 810 aaKnown RBP eCLIP5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 TSPAN9O75954 239 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 MTA2O94776 668 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 IPO7O95373 1038 aaKnown RBP5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 HOXD13P35453 343 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 PSMB10P40306 273 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 RASSF2P50749 326 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 HDAC4P56524 1084 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 SRSF4Q08170 494 aaKnown RBP5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 CSTF3Q12996 717 aaKnown RBP5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 AIMP2Q13155 320 aaKnown RBP5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 MTX1Q13505 466 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 OLIG2Q13516 323 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 CRYMQ14894 314 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 TCTN1Q2MV58 587 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 DCAF6Q58WW2 860 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 HEPHL1Q6MZM0 1159 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 HMBOX1Q6NT76 420 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 IKBIPQ70UQ0 350 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 PATL1Q86TB9 770 aaKnown RBP5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 ARHGAP12Q8IWW6 846 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 RBFAQ8N0V3 343 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 HORMAD2Q8N7B1 307 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 SNRNP27Q8WVK2 155 aaKnown RBP5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 SGCDQ92629 289 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 GTF3C6Q969F1 213 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 NSUN4Q96CB9 384 aaKnown RBP5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 CCDC34Q96HJ3 373 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 BBS4Q96RK4 519 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 CRAMP1Q96RY5 1269 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 PLEKHA4Q9H4M7 779 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 FBRSL1Q9HCM7 1045 aaKnown RBP5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 HAUS2Q9NVX0 235 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 TUBA8Q9NY65 449 aaPredicted RBP5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 C11orf21Q9P2W6 132 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 VPS28Q9UK41 221 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 PCDHA12Q9UN75 941 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 RABGAP1Q9Y3P9 1069 aa5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.29□□□□□ -1.56
GAPVD1-211ENST00000467707 ZNF804BA4D1E1 1349 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 A6NCN8 305 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 CGB1A6NKQ9 187 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 ZNF814B7Z6K7 855 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 SCAMP1O15126 338 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 SLC25A17O43808 307 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 ATG13O75143 517 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 GFPT2O94808 682 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 MLYCDO95822 493 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 FGBP02675 491 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 HOXD9P28356 352 aaPredicted RBP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 TM4SF1P30408 202 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 PPARGP37231 505 aaPredicted RBP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 AVPR1AP37288 418 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 SSBP2P81877 361 aaPredicted RBP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 FAM27E3Q08E93 113 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 NIPAL4Q0D2K0 466 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 CUL4AQ13619 759 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 SRSF7Q16629 238 aaKnown RBP eCLIP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 Q5PR19 223 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 ASPHD1Q5U4P2 390 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 ZKSCAN2Q63HK3 967 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 CYP20A1Q6UW02 462 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 DNAJC10Q8IXB1 793 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 ARFGAP1Q8N6T3 406 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 C16orf52Q8NHV5 167 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 TMEM174Q8WUU8 243 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 SLC35F5Q8WV83 523 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 PSPC1Q8WXF1 523 aaKnown RBP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 DDB2Q92466 427 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 SNAPC3Q92966 411 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 MSI2Q96DH6 328 aaKnown RBP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 ZC3HAV1LQ96H79 300 aaKnown RBP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 RSRC1Q96IZ7 334 aaKnown RBP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 SIN3AQ96ST3 1273 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 NUDT16L1Q9BRJ7 211 aaKnown RBP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 GHITMQ9H3K2 345 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 SH2D4AQ9H788 454 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 MVB12BQ9H7P6 319 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 MAP6D1Q9H9H5 199 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 SMYD2Q9NRG4 433 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 SEPT11Q9NVA2 429 aaKnown RBP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 DLGAP2Q9P1A6 1054 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 PLEKHB1Q9UF11 243 aaPredicted RBP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 NDRG3Q9UGV2 375 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 AAR2Q9Y312 384 aaKnown RBP5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 CAPN7Q9Y6W3 813 aa5.28□□□□□ -1.56
GAPVD1-211ENST00000467707 A6NNC1 897 aa5.27□□□□□ -1.57
GAPVD1-211ENST00000467707 MYO1GB0I1T2 1018 aa5.27□□□□□ -1.57
GAPVD1-211ENST00000467707 KLRF2D3W0D1 207 aa5.27□□□□□ -1.57
GAPVD1-211ENST00000467707 NPIPB11E5RHQ5 1161 aa5.27□□□□□ -1.57
GAPVD1-211ENST00000467707 STMND1H3BQB6 276 aa5.27□□□□□ -1.57
GAPVD1-211ENST00000467707 SEC14L5O43304 696 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms