RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 SCML1Q9UN30 329 aa12.26□□□□□ -0.45
CTNS-205ENST00000467663 R3HDM2Q9Y2K5 976 aaKnown RBP12.26□□□□□ -0.45
CTNS-205ENST00000467663 HEY1Q9Y5J3 304 aa12.26□□□□□ -0.45
CTNS-205ENST00000467663 CEP192Q8TEP8 1941 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 PCDH15Q96QU1 1955 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.25□□□□□ -0.45
CTNS-205ENST00000467663 EDDM13A0A1B0GTR0 161 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 FAM72CH0Y354 149 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 GIPC1O14908 333 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 RNASEH1O60930 286 aaKnown RBP12.25□□□□□ -0.45
CTNS-205ENST00000467663 CLDN11O75508 207 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 GJB3O75712 270 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 MZF1P28698 734 aaPredicted RBP12.25□□□□□ -0.45
CTNS-205ENST00000467663 IRAK1P51617 712 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 CDH4P55283 916 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 GALNT2Q10471 571 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 CALCOCO2Q13137 446 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 SNX1Q13596 522 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 LLGL1Q15334 1064 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 P3H1Q32P28 736 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 TTC31Q49AM3 519 aaPredicted RBP12.25□□□□□ -0.45
CTNS-205ENST00000467663 TMCO4Q5TGY1 634 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 FAM72AQ5TYM5 149 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 FAM72DQ6L9T8 149 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 CCNI2Q6ZMN8 369 aaPredicted RBP12.25□□□□□ -0.45
CTNS-205ENST00000467663 ZNF783Q6ZMS7 281 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 USP30Q70CQ3 517 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 C14orf80Q86SX3 495 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 FAM72BQ86X60 149 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 MINDY1Q8N5J2 469 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 ATG4AQ8WYN0 398 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 PTPRN2Q92932 1015 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 TSGA13Q96PP4 275 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 PPP1R2P1Q96PQ5 205 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 QKIQ96PU8 341 aaKnown RBP eCLIP12.25□□□□□ -0.45
CTNS-205ENST00000467663 FAM129BQ96TA1 746 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 GTPBP2Q9BX10 602 aaKnown RBP12.25□□□□□ -0.45
CTNS-205ENST00000467663 ZDHHC5Q9C0B5 715 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 BTBD1Q9H0C5 482 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 PABPC3Q9H361 631 aaKnown RBP12.25□□□□□ -0.45
CTNS-205ENST00000467663 C6orf106Q9H6K1 298 aaPredicted RBP12.25□□□□□ -0.45
CTNS-205ENST00000467663 SGK2Q9HBY8 427 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 EPB41L5Q9HCM4 733 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 TMPRSS4Q9NRS4 437 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 HAUS2Q9NVX0 235 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 PAK5Q9P286 719 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 DMGDHQ9UI17 866 aaKnown RBP12.25□□□□□ -0.45
CTNS-205ENST00000467663 VANGL2Q9ULK5 521 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 TBC1D30Q9Y2I9 924 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 NEU2Q9Y3R4 380 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 OR51B4Q9Y5P0 310 aa12.25□□□□□ -0.45
CTNS-205ENST00000467663 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 CXorf51AA0A1B0GTR3 108 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 ARHGAP42A6NI28 874 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 OPHN1O60890 802 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 SEMA4FO95754 770 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 KRT14P02533 472 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 PECAM1P16284 738 aaPredicted RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 CCNCP24863 283 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 NNMTP40261 264 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 PI4KAP42356 2102 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 KCNJ1P48048 391 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 SHC2P98077 582 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 GUCY2DQ02846 1103 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 GBE1Q04446 702 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 PPIDQ08752 370 aaKnown RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 SFSWAPQ12872 951 aaKnown RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 SLC14A1Q13336 389 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 ZNF177Q13360 481 aaPredicted RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 CST6Q15828 149 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 PARP15Q460N3 678 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 RNF219Q5W0B1 726 aaPredicted RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 EMBQ6PCB8 327 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 SETD3Q86TU7 594 aaPredicted RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 NLRP14Q86W24 1093 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 HDDC3Q8N4P3 179 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 ZCCHC9Q8N567 271 aaKnown RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 OR52K2Q8NGK3 314 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 SHROOM3Q8TF72 1996 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 SNF8Q96H20 258 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 PKNOX2Q96KN3 472 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 RPL10LQ96L21 214 aaKnown RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 CNTNAP3BQ96NU0 1288 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 FEM1AQ9BSK4 669 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 FRMD8Q9BZ67 464 aaPredicted RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 CNTNAP3Q9BZ76 1288 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 MIR1-1HGQ9H1L0 117 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.24□□□□□ -0.45
CTNS-205ENST00000467663 EIF2B4Q9UI10 523 aaKnown RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 NEU3Q9UQ49 428 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 NCKAP1Q9Y2A7 1128 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 V9GYY5 206 aaPredicted RBP12.24□□□□□ -0.45
CTNS-205ENST00000467663 LAMA1P25391 3075 aa12.24□□□□□ -0.45
CTNS-205ENST00000467663 C5orf60A6NFR6 353 aa12.23□□□□□ -0.45
CTNS-205ENST00000467663 BCAT2O15382 392 aaPredicted RBP12.23□□□□□ -0.45
CTNS-205ENST00000467663 MFSD11O43934 449 aa12.23□□□□□ -0.45
CTNS-205ENST00000467663 GCATO75600 419 aa12.23□□□□□ -0.45
CTNS-205ENST00000467663 CD59P13987 128 aa12.23□□□□□ -0.45
CTNS-205ENST00000467663 H2AFXP16104 143 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms