RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ABCC13Q9NSE7 274 aa12.8□□□□□ -0.36
UBR4-210ENST00000466969 NEU2Q9Y3R4 380 aa12.8□□□□□ -0.36
UBR4-210ENST00000466969 ARGFXA6NJG6 315 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 TMEM110-MUSTN1A8MSY1 372 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 CLIC2O15247 247 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 SPTLC2O15270 562 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 EIF3DO15371 548 aaKnown RBP eCLIP12.79□□□□□ -0.36
UBR4-210ENST00000466969 KCNN4O15554 427 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 TSPAN6O43657 245 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 CD2BP2O95400 341 aaKnown RBP12.79□□□□□ -0.36
UBR4-210ENST00000466969 TNFP01375 233 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 IGLV3-27P01718 113 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 GAP43P17677 238 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 ADRA1BP35368 520 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 UBA7P41226 1012 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 PEX5P50542 639 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 CASP5P51878 434 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 PLK1P53350 603 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 TBX4P57082 545 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 SLC8A3P57103 927 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 SRP54P61011 504 aaKnown RBP12.79□□□□□ -0.36
UBR4-210ENST00000466969 NCOA4Q13772 614 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 PLEKHN1Q494U1 663 aaPredicted RBP12.79□□□□□ -0.36
UBR4-210ENST00000466969 RAB41Q5JT25 222 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 SPECC1LQ69YQ0 1117 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 C6orf15Q6UXA7 325 aaPredicted RBP12.79□□□□□ -0.36
UBR4-210ENST00000466969 PIGZQ86VD9 579 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 OR2A12Q8NGT7 310 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 KIAA1524Q8TCG1 905 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 LARP4BQ92615 738 aaKnown RBP12.79□□□□□ -0.36
UBR4-210ENST00000466969 ZNF516Q92618 1163 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 C14orf79Q96F83 325 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
UBR4-210ENST00000466969 RBM15Q96T37 977 aaKnown RBP eCLIP12.79□□□□□ -0.363e-9■□□□□ 8.5
UBR4-210ENST00000466969 C1QTNF7Q9BXJ2 289 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 UBXN6Q9BZV1 441 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 KLQ9UEF7 1012 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 IL36AQ9UHA7 158 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 PCDHGB6Q9Y5F9 930 aa12.79□□□□□ -0.36
UBR4-210ENST00000466969 POLR1CO15160 346 aaPredicted RBP12.78□□□□□ -0.36
UBR4-210ENST00000466969 EIF5BO60841 1220 aaKnown RBP12.78□□□□□ -0.36
UBR4-210ENST00000466969 MAP3K6O95382 1288 aa12.78□□□□□ -0.36
UBR4-210ENST00000466969 PPM1FP49593 454 aaPredicted RBP12.78□□□□□ -0.36
UBR4-210ENST00000466969 TOB1P50616 345 aaPredicted RBP12.78□□□□□ -0.36
UBR4-210ENST00000466969 TLE4Q04727 773 aa12.78□□□□□ -0.36
UBR4-210ENST00000466969 DNM1Q05193 864 aaKnown RBP12.78□□□□□ -0.36
UBR4-210ENST00000466969 NKAIN2Q5VXU1 208 aa12.78□□□□□ -0.36
UBR4-210ENST00000466969 ZNF517Q6ZMY9 492 aaPredicted RBP12.78□□□□□ -0.36
UBR4-210ENST00000466969 PRIMA1Q86XR5 153 aa12.78□□□□□ -0.36
UBR4-210ENST00000466969 PARP9Q8IXQ6 854 aa12.78□□□□□ -0.36
UBR4-210ENST00000466969 LGI2Q8N0V4 545 aa12.78□□□□□ -0.36
UBR4-210ENST00000466969 ATL2Q8NHH9 583 aa12.78□□□□□ -0.36
UBR4-210ENST00000466969 TWNKQ96RR1 684 aa12.78□□□□□ -0.36
UBR4-210ENST00000466969 ULBP3Q9BZM4 244 aa12.78□□□□□ -0.36
UBR4-210ENST00000466969 APMAPQ9HDC9 416 aa12.78□□□□□ -0.36
UBR4-210ENST00000466969 MAP1AP78559 2803 aaPredicted RBP12.77□□□□□ -0.36
UBR4-210ENST00000466969 FBN1P35555 2871 aaKnown RBP12.77□□□□□ -0.36
UBR4-210ENST00000466969 RNF103O00237 685 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 LEFTY1O75610 366 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 GPR3P46089 330 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 CYP24A1Q07973 514 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 FOXM1Q08050 763 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 NR1D2Q14995 579 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 TMEM71Q6P5X7 295 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 ATP11CQ8NB49 1132 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 CHST14Q8NCH0 376 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 ITLN2Q8WWU7 325 aaPredicted RBP12.77□□□□□ -0.37
UBR4-210ENST00000466969 TAF4BQ92750 862 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 STAMBPL1Q96FJ0 436 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 ILKAPQ9H0C8 392 aaPredicted RBP12.77□□□□□ -0.37
UBR4-210ENST00000466969 MCCC2Q9HCC0 563 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 TMEM9Q9P0T7 183 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 B3GNT3Q9Y2A9 372 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 PCDHGA6Q9Y5G7 932 aa12.77□□□□□ -0.37
UBR4-210ENST00000466969 A8MU76 341 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 MOCS2O96007 188 aaPredicted RBP12.76□□□□□ -0.37
UBR4-210ENST00000466969 SRCP12931 536 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 FOSL1P15407 271 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 L1CAMP32004 1257 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 MAZP56270 477 aaKnown RBP12.76□□□□□ -0.37
UBR4-210ENST00000466969 DPYDQ12882 1025 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 SGSM1Q2NKQ1 1148 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 SNAP47Q5SQN1 464 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 MSANTD2Q6P1R3 559 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 PARS2Q7L3T8 475 aaKnown RBP12.76□□□□□ -0.37
UBR4-210ENST00000466969 BHLHA9Q7RTU4 235 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 CCAR2Q8N163 923 aaKnown RBP12.76□□□□□ -0.37
UBR4-210ENST00000466969 FDCSPQ8NFU4 85 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 AK8Q96MA6 479 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 BARD1Q99728 777 aaKnown RBP12.76□□□□□ -0.37
UBR4-210ENST00000466969 LRRC4Q9HBW1 653 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 MBNL1Q9NR56 388 aaKnown RBP12.76□□□□□ -0.37
UBR4-210ENST00000466969 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.76□□□□□ -0.37
UBR4-210ENST00000466969 OLFML3Q9NRN5 406 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 TMEM63CQ9P1W3 806 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 USP25Q9UHP3 1055 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 VPS28Q9UK41 221 aa12.76□□□□□ -0.37
UBR4-210ENST00000466969 YJEFN3A6XGL0 299 aa12.75□□□□□ -0.37
UBR4-210ENST00000466969 E7ENQ6 273 aa12.75□□□□□ -0.37
UBR4-210ENST00000466969 REC8O95072 547 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms