RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 CCDC117Q8IWD4 279 aaPredicted RBP3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 MB21D2Q8IYB1 491 aaPredicted RBP3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 LMNTD1Q8N9Z9 388 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 KBTBD3Q8NAB2 608 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 ZMIZ2Q8NF64 920 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 LINS1Q8NG48 757 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 OR6Y1Q8NGX8 325 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 THAP4Q8WY91 577 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 NCSTNQ92542 709 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 MASTLQ96GX5 879 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 SLC39A13Q96H72 371 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 UHRF2Q96PU4 802 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 TUBA1CQ9BQE3 449 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 C1QTNF5Q9BXJ0 243 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 EVA1AQ9H8M9 152 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 ANKRD10Q9NXR5 420 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 OR6C3Q9NZP0 311 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 LRCH1Q9Y2L9 728 aa3.05□□□□□ -1.92
GTF3C3-209ENST00000466862 IGHV4OR15-8A0A075B7B6 117 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 LMX1BO60663 402 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 KDM4BO94953 1096 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 ANOS1P23352 680 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 ARSFP54793 590 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 ECT2LQ008S8 904 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 ZBTB17Q13105 803 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 BLMHQ13867 455 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 CALCRLQ16602 461 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 PLEKHO1Q53GL0 409 aaPredicted RBP3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 JMJD6Q6NYC1 403 aaPredicted RBP3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 KLHL24Q6TFL4 600 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 NEK10Q6ZWH5 1172 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 CIARTQ8N365 385 aaPredicted RBP3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 RNFT2Q96EX2 444 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 YME1L1Q96TA2 773 aa3.04□□□□□ -1.92
GTF3C3-209ENST00000466862 ADGRF5Q8IZF2 1346 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 A0A0U1RQF3 1178 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 ZNF587BE7ETH6 402 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 SEPT4O43236 478 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 IFIT2P09913 472 aaKnown RBP3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 ITGAXP20702 1163 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 RYKP34925 604 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 HNF1BP35680 557 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 CRIP2P52943 208 aaPredicted RBP3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 TROAPQ12815 778 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 RBBP5Q15291 538 aaKnown RBP3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 EFNB3Q15768 340 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 TUBB8Q3ZCM7 444 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 ADAM5Q6NVV9 412 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 UNQ6126/PRO20091Q6UXV3 157 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 ANKRD44Q8N8A2 993 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 RASSF8Q8NHQ8 419 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 LNX1Q8TBB1 728 aaPredicted RBP3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 CSGALNACT1Q8TDX6 532 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 WBP2Q969T9 261 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 RNF183Q96D59 192 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 CCDC136Q96JN2 1154 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 LRFN5Q96NI6 719 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 CLSTN3Q9BQT9 956 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 PCGF6Q9BYE7 350 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 LMAN2LQ9H0V9 348 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 NOX4Q9NPH5 578 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 SPATS2LQ9NUQ6 558 aaKnown RBP3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 SMARCAL1Q9NZC9 954 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 ZNF224Q9NZL3 707 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 C1RLQ9NZP8 487 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 SLCO3A1Q9UIG8 710 aa3.03□□□□□ -1.92
GTF3C3-209ENST00000466862 HMX3A6NHT5 357 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 CLGNO14967 610 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 HSPA12AO43301 675 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 DHX16O60231 1041 aaKnown RBP3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 IL1AP01583 271 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 TK1P04183 234 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 SRD5A1P18405 259 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 PEX5P50542 639 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 OASLQ15646 514 aaKnown RBP3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 EXOC3L1Q86VI1 746 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 SDCCAG3Q96C92 435 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 NPLQ9BXD5 320 aaPredicted RBP3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 TAF1DQ9H5J8 278 aaPredicted RBP3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 ENTPD7Q9NQZ7 604 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 SLC9A2Q9UBY0 812 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 SIX4Q9UIU6 781 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 SNED1Q8TER0 1413 aa3.02□□□□□ -1.93
GTF3C3-209ENST00000466862 SLC25A17O43808 307 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 KRT38O76015 456 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 CLDN14O95500 239 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 MARK3P27448 753 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 ADD2P35612 726 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 RBM5P52756 815 aaKnown RBP eCLIP3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 ZNF155Q12901 538 aaPredicted RBP3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 CUL4BQ13620 913 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 SLC18A3Q16572 532 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 CBWD5Q5RIA9 395 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 FAM83BQ5T0W9 1011 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 PMS2CLQ68D20 193 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 SHFQ7M4L6 423 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 SATL1Q86VE3 508 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 NEK9Q8TD19 979 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 POF1BQ8WVV4 589 aa3.01□□□□□ -1.93
GTF3C3-209ENST00000466862 GOLGA1Q92805 767 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms