RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 PTMSP20962 102 aa26.17■■□□□ 1.78
U2AF1-206ENST00000464750 PCK1P35558 622 aa26.17■■□□□ 1.78
U2AF1-206ENST00000464750 RABIFP47224 123 aa26.17■■□□□ 1.78
U2AF1-206ENST00000464750 ZBED6P86452 979 aa26.17■■□□□ 1.78
U2AF1-206ENST00000464750 PROX2Q3B8N5 592 aa26.17■■□□□ 1.78
U2AF1-206ENST00000464750 PROSER1Q86XN7 944 aa26.17■■□□□ 1.78
U2AF1-206ENST00000464750 ARHGAP12Q8IWW6 846 aa26.17■■□□□ 1.78
U2AF1-206ENST00000464750 NPWQ8N729 165 aa26.17■■□□□ 1.78
U2AF1-206ENST00000464750 CPLX3Q8WVH0 158 aa26.17■■□□□ 1.78
U2AF1-206ENST00000464750 IFT43Q96FT9 208 aa26.17■■□□□ 1.78
U2AF1-206ENST00000464750 CPEB1Q9BZB8 566 aaKnown RBP26.17■■□□□ 1.78
U2AF1-206ENST00000464750 CCDC86Q9H6F5 360 aaKnown RBP26.17■■□□□ 1.78
U2AF1-206ENST00000464750 DNAJC28Q9NX36 388 aa26.17■■□□□ 1.78
U2AF1-206ENST00000464750 ZFHX4Q86UP3 3567 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 DMXL2Q8TDJ6 3036 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 TRIM38O00635 465 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 FFAR2O15552 330 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 SIGLEC6O43699 453 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 C1SP09871 688 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 CKMT2P17540 419 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 ZNF135P52742 658 aaPredicted RBP26.16■■□□□ 1.78
U2AF1-206ENST00000464750 SMTNL2Q2TAL5 461 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 ZSCAN23Q3MJ62 389 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 ZNF542PQ5EBM4 170 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 AFMIDQ63HM1 303 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 KDM7AQ6ZMT4 941 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 TMPRSS12Q86WS5 348 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 CXorf40AQ8TE69 158 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 IQCDQ96DY2 449 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 SP110Q9HB58 689 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 CWC15Q9P013 229 aaKnown RBP26.16■■□□□ 1.78
U2AF1-206ENST00000464750 IFNKQ9P0W0 207 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 CAPN11Q9UMQ6 739 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 KNTC1P50748 2209 aa26.16■■□□□ 1.78
U2AF1-206ENST00000464750 ANKRD11Q6UB99 2663 aaPredicted RBP26.15■■□□□ 1.78
U2AF1-206ENST00000464750 ACACAQ13085 2346 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 DFFAO00273 331 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 CDK4P11802 303 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 TIMP2P16035 220 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 ITIH2P19823 946 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 XPAP23025 273 aaPredicted RBP26.15■■□□□ 1.78
U2AF1-206ENST00000464750 IL1R2P27930 398 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 CLDN6P56747 220 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 ZNF211Q13398 564 aaPredicted RBP26.15■■□□□ 1.78
U2AF1-206ENST00000464750 DPYSQ14117 519 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 FZD2Q14332 565 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 ACAP1Q15027 740 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 HS1BP3Q53T59 392 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 PARGQ86W56 976 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 OR4C6Q8NH72 309 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 MDM1Q8TC05 714 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 THAP2Q9H0W7 228 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 ZWILCHQ9H900 591 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 APC2O95996 2303 aa26.15■■□□□ 1.78
U2AF1-206ENST00000464750 MYLKQ15746 1914 aa26.14■■□□□ 1.78
U2AF1-206ENST00000464750 CHD6Q8TD26 2715 aa26.14■■□□□ 1.78
U2AF1-206ENST00000464750 SPTY2D1-AS1A0A0U1RR47 76 aa26.14■■□□□ 1.78
U2AF1-206ENST00000464750 TAF4O00268 1085 aa26.14■■□□□ 1.78
U2AF1-206ENST00000464750 MMP20O60882 483 aa26.14■■□□□ 1.78
U2AF1-206ENST00000464750 GYPCP04921 128 aa26.14■■□□□ 1.78
U2AF1-206ENST00000464750 TCF4P15884 667 aa26.14■■□□□ 1.78
U2AF1-206ENST00000464750 IGFALSP35858 605 aa26.14■■□□□ 1.78
U2AF1-206ENST00000464750 HCAR3P49019 387 aa26.14■■□□□ 1.78
U2AF1-206ENST00000464750 PDE1CQ14123 709 aaPredicted RBP26.14■■□□□ 1.78
U2AF1-206ENST00000464750 GRM3Q14832 879 aa26.14■■□□□ 1.78
U2AF1-206ENST00000464750 ARHGAP36Q6ZRI8 547 aa26.14■■□□□ 1.78
U2AF1-206ENST00000464750 WRAP53Q9BUR4 548 aaKnown RBP26.14■■□□□ 1.78
U2AF1-206ENST00000464750 IPO11Q9UI26 975 aaKnown RBP26.14■■□□□ 1.78
U2AF1-206ENST00000464750 LUC7L2Q9Y383 392 aaKnown RBP26.14■■□□□ 1.78
U2AF1-206ENST00000464750 TSPAN11A1L157 253 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 H3BRJ5 948 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 PALMO75781 387 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 TM7SF2O76062 418 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 HNF1BP35680 557 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 RGRP47804 291 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 SUOXP51687 545 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 PFN3P60673 137 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 HNRNPKP61978 463 aaKnown RBP eCLIP26.13■■□□□ 1.77
U2AF1-206ENST00000464750 ELP6Q0PNE2 266 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 ILKQ13418 452 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 CAMK2BQ13554 666 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 DPYSL2Q16555 572 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 TPRG1LQ5T0D9 272 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 CFAP58Q5T655 872 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 TSEN2Q8NCE0 465 aaKnown RBP26.13■■□□□ 1.77
U2AF1-206ENST00000464750 HSPH1Q92598 858 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 CINPQ9BW66 212 aaPredicted RBP26.13■■□□□ 1.77
U2AF1-206ENST00000464750 C1QTNF7Q9BXJ2 289 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 SUV39H2Q9H5I1 410 aa26.13■■□□□ 1.77
U2AF1-206ENST00000464750 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.13■■□□□ 1.77
U2AF1-206ENST00000464750 A0A087X0T9 212 aa26.12■■□□□ 1.77
U2AF1-206ENST00000464750 H3BM21 787 aa26.12■■□□□ 1.77
U2AF1-206ENST00000464750 CSF2P04141 144 aa26.12■■□□□ 1.77
U2AF1-206ENST00000464750 FAM228BP0C875 321 aa26.12■■□□□ 1.77
U2AF1-206ENST00000464750 GIMD1P0DJR0 217 aa26.12■■□□□ 1.77
U2AF1-206ENST00000464750 ALPPL2P10696 532 aa26.12■■□□□ 1.77
U2AF1-206ENST00000464750 NME1P15531 152 aaKnown RBP26.12■■□□□ 1.77
U2AF1-206ENST00000464750 ACP1P24666 158 aa26.12■■□□□ 1.77
U2AF1-206ENST00000464750 ARL4AP40617 200 aa26.12■■□□□ 1.77
U2AF1-206ENST00000464750 DAB2P98082 770 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms