RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 NUP93Q8N1F7 819 aa12.56□□□□□ -0.4
HDAC4-208ENST00000463007 APBB2Q92870 758 aa12.56□□□□□ -0.4
HDAC4-208ENST00000463007 LRCH3Q96II8 777 aa12.56□□□□□ -0.4
HDAC4-208ENST00000463007 ZFRQ96KR1 1074 aaKnown RBP12.56□□□□□ -0.4
HDAC4-208ENST00000463007 HSFY1Q96LI6 401 aa12.56□□□□□ -0.4
HDAC4-208ENST00000463007 POMKQ9H5K3 350 aa12.56□□□□□ -0.4
HDAC4-208ENST00000463007 FAM96AQ9H5X1 160 aa12.56□□□□□ -0.4
HDAC4-208ENST00000463007 MTF2Q9Y483 593 aaPredicted RBP12.56□□□□□ -0.4
HDAC4-208ENST00000463007 PTGDR2Q9Y5Y4 395 aa12.56□□□□□ -0.4
HDAC4-208ENST00000463007 CEPT1Q9Y6K0 416 aa12.56□□□□□ -0.4
HDAC4-208ENST00000463007 GABRDO14764 452 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 TREHO43280 583 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 TOMM70O94826 608 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 CD4P01730 458 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 NR2C2P49116 596 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 SLC5A3P53794 718 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 XIAPP98170 497 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 PLIN5Q00G26 463 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 ATP1A4Q13733 1029 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 NEDD8Q15843 81 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 PIGZQ86VD9 579 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 CANT1Q8WVQ1 401 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 DNAJB3Q8WWF6 145 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 RMND5BQ96G75 393 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-208ENST00000463007 PPP1R10Q96QC0 940 aaKnown RBP12.55□□□□□ -0.4
HDAC4-208ENST00000463007 CCDC28BQ9BUN5 200 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 FNDC1Q4ZHG4 1894 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-208ENST00000463007 PRORSD1PA6NEY8 169 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 TCAF2A6NFQ2 919 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 DYNC1LI2O43237 492 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-208ENST00000463007 AHSGP02765 367 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 PNPLA4P41247 253 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 SLC12A2P55011 1212 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 MAP2K5Q13163 448 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 CAPRIN1Q14444 709 aaKnown RBP12.55□□□□□ -0.4
HDAC4-208ENST00000463007 PLCL1Q15111 1095 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 KIF19Q2TAC6 998 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 KIAA0319Q5VV43 1072 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 LIPMQ5VYY2 423 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 PGAM4Q8N0Y7 254 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 KLHL23Q8NBE8 558 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 HNRNPABQ99729 332 aaKnown RBP12.55□□□□□ -0.4
HDAC4-208ENST00000463007 ARMC7Q9H6L4 198 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 TNFRSF12AQ9NP84 129 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 PIGVQ9NUD9 493 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 SLC2A6Q9UGQ3 507 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 PTPRDP23468 1912 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 ZCWPW2A0A1B0GU75 182 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 CHRM3P20309 590 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 PTPN3P26045 913 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 PSEN2P49810 448 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 SLC7A2P52569 658 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 CSE1LP55060 971 aaKnown RBP12.55□□□□□ -0.4
HDAC4-208ENST00000463007 LILRA4P59901 499 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 TPI1P60174 286 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 ZBTB17Q13105 803 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 FASTKQ14296 549 aaKnown RBP12.55□□□□□ -0.4
HDAC4-208ENST00000463007 GPR107Q5VW38 600 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 TTC33Q6PID6 262 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-208ENST00000463007 C4orf22Q6V702 233 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 AHI1Q8N157 1196 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 ADCY4Q8NFM4 1077 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 SNX25Q9H3E2 840 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 LRRC4Q9HBW1 653 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 FZD10Q9ULW2 581 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 IPPQ9Y573 584 aa12.55□□□□□ -0.4
HDAC4-208ENST00000463007 SLC4A1P02730 911 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 FAM163BP0C2L3 166 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 EEF1B2P24534 225 aaKnown RBP12.54□□□□□ -0.4
HDAC4-208ENST00000463007 MATKP42679 507 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 MAP3K7CLP57077 242 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 IKBKEQ14164 716 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 FUT11Q495W5 492 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 STEAP4Q687X5 459 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 CNSTQ6PJW8 725 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 PSTKQ8IV42 348 aaKnown RBP12.54□□□□□ -0.4
HDAC4-208ENST00000463007 TOP6BLQ8N6T0 577 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 NPWQ8N729 165 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 KCTD13Q8WZ19 329 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 THAP11Q96EK4 314 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 ZNF560Q96MR9 790 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 RBM38Q9H0Z9 239 aaKnown RBP12.54□□□□□ -0.4
HDAC4-208ENST00000463007 ZBTB26Q9HCK0 441 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 RCOR3Q9P2K3 495 aaPredicted RBP12.54□□□□□ -0.4
HDAC4-208ENST00000463007 DSEQ9UL01 958 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 PRPF19Q9UMS4 504 aaKnown RBP12.54□□□□□ -0.4
HDAC4-208ENST00000463007 MYRFQ9Y2G1 1151 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 ACOT9Q9Y305 439 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 Q9Y3F1 56 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 NLRC5Q86WI3 1866 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 TTC3P53804 2025 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 SOCS2O14508 198 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 DDHD2O94830 711 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 NCAM1P13591 858 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 ZNF26P17031 533 aaPredicted RBP12.54□□□□□ -0.4
HDAC4-208ENST00000463007 KCNA5P22460 613 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 ACADSBP45954 432 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 CRYBB1P53674 252 aaPredicted RBP12.54□□□□□ -0.4
HDAC4-208ENST00000463007 SNX16P57768 344 aa12.54□□□□□ -0.4
HDAC4-208ENST00000463007 PRKAA1Q13131 559 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms