RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 ZSCAN1Q8NBB4 408 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 GPR156Q8NFN8 814 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 PCDH19Q8TAB3 1148 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 GRIN3AQ8TCU5 1115 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 STK32AQ8WU08 396 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 KAT5Q92993 513 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 USP7Q93009 1102 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 SLC35C1Q96A29 364 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 FAM149B1Q96BN6 582 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 INTS4Q96HW7 963 aaKnown RBP7.84□□□□□ -1.15
SMC3-202ENST00000462899 PPP1R16AQ96I34 528 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 FEM1CQ96JP0 617 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 CCDC114Q96M63 670 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 RPRD1AQ96P16 312 aaPredicted RBP7.84□□□□□ -1.15
SMC3-202ENST00000462899 SLC2A13Q96QE2 648 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 PPP1R9BQ96SB3 815 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 CPEB1Q9BZB8 566 aaKnown RBP7.84□□□□□ -1.15
SMC3-202ENST00000462899 LRRN3Q9H3W5 708 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 ANLNQ9NQW6 1124 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 DYRK4Q9NR20 520 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 APPL1Q9UKG1 709 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 VANGL2Q9ULK5 521 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 HPSEQ9Y251 543 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 PLAAQ9Y263 795 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 HS3ST4Q9Y661 456 aa7.84□□□□□ -1.15
SMC3-202ENST00000462899 ITPR3Q14573 2671 aa7.84□□□□□ -1.16
SMC3-202ENST00000462899 NF1P21359 2839 aa7.84□□□□□ -1.16
SMC3-202ENST00000462899 A0A0D9SEW6 157 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 ENO4A6NNW6 628 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 E5RJQ4 531 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 TOR1BO14657 336 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 AREL1O15033 823 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 PMM2O15305 246 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 TSPAN6O43657 245 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 STX10O60499 249 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 CNTN5O94779 1100 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 ANXA6P08133 673 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 PNLIPP16233 465 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 CCR1P32246 355 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 SMCPP49901 116 aaPredicted RBP7.83□□□□□ -1.16
SMC3-202ENST00000462899 CDH4P55283 916 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 YPEL5P62699 121 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 YWHAZP63104 245 aaKnown RBP7.83□□□□□ -1.16
SMC3-202ENST00000462899 DPYDQ12882 1025 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 CBLBQ13191 982 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 PTK2BQ14289 1009 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 C16orf72Q14CZ0 275 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 TAF5Q15542 800 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 CERCAMQ5T4B2 595 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 KCTD16Q68DU8 428 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 ESRP1Q6NXG1 681 aaKnown RBP7.83□□□□□ -1.16
SMC3-202ENST00000462899 SPRED1Q7Z699 444 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 CEP57L1Q8IYX8 460 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 FSTL5Q8N475 847 aaPredicted RBP7.83□□□□□ -1.16
SMC3-202ENST00000462899 ATP11CQ8NB49 1132 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 TP53I13Q8NBR0 393 aaPredicted RBP7.83□□□□□ -1.16
SMC3-202ENST00000462899 LMO3Q8TAP4 145 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 NKD1Q969G9 470 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 RNF34Q969K3 372 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 PMEPA1Q969W9 287 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 ZNF396Q96N95 335 aaPredicted RBP7.83□□□□□ -1.16
SMC3-202ENST00000462899 C2orf49Q9BVC5 232 aaPredicted RBP7.83□□□□□ -1.16
SMC3-202ENST00000462899 TRIM62Q9BVG3 475 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 CEP44Q9C0F1 390 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 TNKS2Q9H2K2 1166 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 SYNDIG1Q9H7V2 258 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 FAM13BQ9NYF5 915 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 GMPR2Q9P2T1 348 aaKnown RBP7.83□□□□□ -1.16
SMC3-202ENST00000462899 PLEKHB1Q9UF11 243 aaPredicted RBP7.83□□□□□ -1.16
SMC3-202ENST00000462899 CNTN6Q9UQ52 1028 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 MAPK8IP1Q9UQF2 711 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 ITM2BQ9Y287 266 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 PAXBP1Q9Y5B6 917 aa7.83□□□□□ -1.16
SMC3-202ENST00000462899 SETD2Q9BYW2 2564 aaPredicted RBP7.83□□□□□ -1.16
SMC3-202ENST00000462899 TNRC6AQ8NDV7 1962 aaKnown RBP7.82□□□□□ -1.16
SMC3-202ENST00000462899 IGLV3-10A0A075B6K4 115 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 FAM237AA0A1B0GTK4 181 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 POM121CA8CG34 1229 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 STMND1H3BQB6 276 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 SLC16A3O15427 465 aaKnown RBP7.82□□□□□ -1.16
SMC3-202ENST00000462899 RNF224P0DH78 156 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 SLC2A3P11169 496 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 LIFP15018 202 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 ACADSBP45954 432 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 RECQLP46063 649 aaPredicted RBP7.82□□□□□ -1.16
SMC3-202ENST00000462899 SERPINH1P50454 418 aaKnown RBP7.82□□□□□ -1.16
SMC3-202ENST00000462899 CCNHP51946 323 aaPredicted RBP7.82□□□□□ -1.16
SMC3-202ENST00000462899 HK3P52790 923 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 KRT83P78385 493 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 NUCB2P80303 420 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 ARF5P84085 180 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 NCAPHQ15003 741 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 ALG11Q2TAA5 492 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 EFHC2Q5JST6 749 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 OGFOD3Q6PK18 319 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 LINGO4Q6UY18 593 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 TRIM46Q7Z4K8 759 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 SETD3Q86TU7 594 aaPredicted RBP7.82□□□□□ -1.16
SMC3-202ENST00000462899 CCNJLQ8IV13 435 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 SFTPA2Q8IWL1 248 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms