RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 CLOCKO15516 846 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 OXSR1O95747 527 aaPredicted RBP15.63■□□□□ 0.09
SSR4-206ENST00000460616 CYP3A5P20815 502 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 AGKQ53H12 422 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 TBCELQ5QJ74 424 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 IRAK1BP1Q5VVH5 260 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 OLFML1Q6UWY5 402 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 PELI3Q8N2H9 469 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 OR52K1Q8NGK4 314 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 TAMM41Q96BW9 452 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 P2RY11Q96G91 374 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 CDHR1Q96JP9 859 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 TMEM181Q9P2C4 612 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 SEPT3Q9UH03 358 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 CROTQ9UKG9 612 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 TSPAN16Q9UKR8 245 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 AURKCQ9UQB9 309 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 MCM3APO60318 1980 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 KRBA1A5PL33 1030 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 FAM149AA5PLN7 773 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 KPNA4O00629 521 aaPredicted RBP15.63■□□□□ 0.09
SSR4-206ENST00000460616 BCL10O95999 233 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 JAK1P23458 1154 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 MAPK10P53779 464 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 SLC6A3Q01959 620 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 GRSF1Q12849 480 aaKnown RBP eCLIP15.63■□□□□ 0.09
SSR4-206ENST00000460616 OLIG2Q13516 323 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 FASTKQ14296 549 aaKnown RBP15.63■□□□□ 0.09
SSR4-206ENST00000460616 KHSRPQ92945 711 aaKnown RBP eCLIP15.63■□□□□ 0.09
SSR4-206ENST00000460616 FBXL20Q96IG2 436 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 FTHL17Q9BXU8 183 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 CCM2LQ9NUG4 571 aaPredicted RBP15.63■□□□□ 0.09
SSR4-206ENST00000460616 HACD3Q9P035 362 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 AP4E1Q9UPM8 1137 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 ANKRD6Q9Y2G4 727 aa15.63■□□□□ 0.09
SSR4-206ENST00000460616 CCDC162PA2VCL2 907 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 SPTLC1O15269 473 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 GRM5P41594 1212 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 VEGFBP49765 207 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 ATXN1P54253 815 aaKnown RBP15.62■□□□□ 0.09
SSR4-206ENST00000460616 SREBF2Q12772 1141 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 IFRD2Q12894 506 aaPredicted RBP15.62■□□□□ 0.09
SSR4-206ENST00000460616 CRHR2Q13324 411 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 HSDL1Q3SXM5 330 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 SLC2A7Q6PXP3 512 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 LCLAT1Q6UWP7 414 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 TMEM135Q86UB9 458 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 C1orf127Q8N9H9 656 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 NETO2Q8NC67 525 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 SHCBP1Q8NEM2 672 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 HMGCLL1Q8TB92 370 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 NSUN6Q8TEA1 469 aaKnown RBP15.62■□□□□ 0.09
SSR4-206ENST00000460616 STYXQ8WUJ0 223 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 VPS39Q96JC1 886 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 CNDP2Q96KP4 475 aaKnown RBP15.62■□□□□ 0.09
SSR4-206ENST00000460616 KCTD15Q96SI1 283 aaPredicted RBP15.62■□□□□ 0.09
SSR4-206ENST00000460616 OLFM1Q99784 485 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 TUBA1CQ9BQE3 449 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 MTG1Q9BT17 334 aaPredicted RBP15.62■□□□□ 0.09
SSR4-206ENST00000460616 C1QTNF1Q9BXJ1 281 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 NIFKQ9BYG3 293 aaKnown RBP15.62■□□□□ 0.09
SSR4-206ENST00000460616 ZFYVE28Q9HCC9 887 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 CROCCQ5TZA2 2017 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 PLXNA1Q9UIW2 1896 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 ZCWPW2A0A1B0GU75 182 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 MRASO14807 208 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 DYNC1LI2O43237 492 aaPredicted RBP15.62■□□□□ 0.09
SSR4-206ENST00000460616 DLX3O60479 287 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 PFKMP08237 780 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 SNRPB2P08579 225 aaKnown RBP15.62■□□□□ 0.09
SSR4-206ENST00000460616 MATN1P21941 496 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 TM4SF4P48230 202 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 PGGT1BP53609 377 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 TMBIM6P55061 237 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 MPP1Q00013 466 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 NOGQ13253 232 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 PMF1Q6P1K2 205 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 IGFN1Q86VF2 1251 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 EPHX4Q8IUS5 362 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 OFCC1Q8IZS5 231 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 FSTL5Q8N475 847 aaPredicted RBP15.62■□□□□ 0.09
SSR4-206ENST00000460616 GPRC5AQ8NFJ5 357 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 SEPT8Q92599 483 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 CCDC138Q96M89 665 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 C9orf16Q9BUW7 83 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 VRTNQ9H8Y1 702 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 CD320Q9NPF0 282 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 TCAF1Q9Y4C2 921 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 SNX9Q9Y5X1 595 aa15.62■□□□□ 0.09
SSR4-206ENST00000460616 PHGDHO43175 533 aaKnown RBP15.61■□□□□ 0.09
SSR4-206ENST00000460616 USP12O75317 370 aa15.61■□□□□ 0.09
SSR4-206ENST00000460616 ITGB3P05106 788 aa15.61■□□□□ 0.09
SSR4-206ENST00000460616 PRKCBP05771 671 aa15.61■□□□□ 0.09
SSR4-206ENST00000460616 GOT1P17174 413 aa15.61■□□□□ 0.09
SSR4-206ENST00000460616 KPNA1P52294 538 aaPredicted RBP15.61■□□□□ 0.09
SSR4-206ENST00000460616 SLC7A2P52569 658 aa15.61■□□□□ 0.09
SSR4-206ENST00000460616 CSE1LP55060 971 aaKnown RBP15.61■□□□□ 0.09
SSR4-206ENST00000460616 SP2Q02086 613 aa15.61■□□□□ 0.09
SSR4-206ENST00000460616 GRM3Q14832 879 aa15.61■□□□□ 0.09
SSR4-206ENST00000460616 ANO4Q32M45 955 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms