RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 CENPTQ96BT3 561 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 LENG8Q96PV6 779 aaPredicted RBP15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 EPAS1Q99814 870 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 SLC39A8Q9C0K1 460 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 SCUBE2Q9NQ36 999 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 NLGN3Q9NZ94 848 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 DAAM1Q9Y4D1 1078 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 RAI2Q9Y5P3 530 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 CPED1A4D0V7 1026 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 BUB1BO60566 1050 aaPredicted RBP15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 IGSF6O95976 241 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 PSMA2P25787 234 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 RABIFP47224 123 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 TPI1P60174 286 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 MAMLD1Q13495 774 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 RTP5Q14D33 572 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 HS1BP3Q53T59 392 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 KCTD16Q68DU8 428 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 TP53I13Q8NBR0 393 aaPredicted RBP15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 IFI44Q8TCB0 444 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 RAB7BQ96AH8 199 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 NAF1Q96HR8 494 aaKnown RBP15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 NAP1L5Q96NT1 182 aaPredicted RBP15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 KCTD15Q96SI1 283 aaPredicted RBP15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 SNRNP25Q9BV90 132 aaKnown RBP15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 DHX35Q9H5Z1 703 aaKnown RBP15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 LRRC19Q9H756 370 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 PDFQ9HBH1 243 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 RTN4Q9NQC3 1192 aaKnown RBP15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 AP4E1Q9UPM8 1137 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 MFHAS1Q9Y4C4 1052 aa15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 URB1O60287 2271 aaKnown RBP15.45■□□□□ 0.06
CROCCP4-201ENST00000457096 ACACAQ13085 2346 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 TTC24A2A3L6 582 aaPredicted RBP15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 PMS2P1A4D2B8 440 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 ANKRD62A6NC57 917 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 WASH4PA8MWX3 477 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 AQP9O43315 295 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 MPOP05164 745 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 ALPPL2P10696 532 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 CDK4P11802 303 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 SKILP12757 684 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 TGM2P21980 687 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 ABCG1P45844 678 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 PAPOLAP51003 745 aaKnown RBP15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 CCDC173Q0VFZ6 552 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 IRF4Q15306 451 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 PERM1Q5SV97 790 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 CDCP2Q5VXM1 449 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 CYP4V2Q6ZWL3 525 aaPredicted RBP15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 ZNF571Q7Z3V5 609 aaPredicted RBP15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 UMODL1-AS1Q8N2C9 162 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 NPWQ8N729 165 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 CXorf40AQ8TE69 158 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 NSMCE3Q96MG7 304 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 NCAPGQ9BPX3 1015 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 OSBPL1AQ9BXW6 950 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 NRSN2Q9GZP1 204 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 CLPBQ9H078 707 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 HAUS4Q9H6D7 363 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 CATSPERBQ9H7T0 1116 aa15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 UBA2Q9UBT2 640 aaPredicted RBP15.44■□□□□ 0.06
CROCCP4-201ENST00000457096 SMG1Q96Q15 3661 aaKnown RBP15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 EEF2KO00418 725 aaKnown RBP15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 DDX3XO00571 662 aaKnown RBP eCLIP15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 MUSKO15146 869 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 CSO75390 466 aaKnown RBP15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 TM7SF2O76062 418 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 TCF4P15884 667 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 ADKP55263 362 aaKnown RBP15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 YBEYP58557 167 aaPredicted RBP15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 E2F1Q01094 437 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 ASIC2Q16515 512 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 PARP15Q460N3 678 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 PRRT3Q5FWE3 981 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 EFL1Q7Z2Z2 1120 aaKnown RBP15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 DCP2Q8IU60 420 aaKnown RBP15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 CAMK1DQ8IU85 385 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 PHACTR4Q8IZ21 702 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 TSEN2Q8NCE0 465 aaKnown RBP15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 TSACCQ96A04 125 aaPredicted RBP15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 FUBP1Q96AE4 644 aaKnown RBP15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 IFT43Q96FT9 208 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 LRRC61Q9BV99 259 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 RETREG1Q9H6L5 497 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 PCDH12Q9NPG4 1184 aa15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 APOBEC3BQ9UH17 382 aaKnown RBP15.43■□□□□ 0.06
CROCCP4-201ENST00000457096 IGSF10Q6WRI0 2623 aa15.42■□□□□ 0.06
CROCCP4-201ENST00000457096 CXorf51AA0A1B0GTR3 108 aa15.42■□□□□ 0.06
CROCCP4-201ENST00000457096 A0A1W2PNU3 283 aaPredicted RBP15.42■□□□□ 0.06
CROCCP4-201ENST00000457096 NEMP2A6NFY4 417 aa15.42■□□□□ 0.06
CROCCP4-201ENST00000457096 ZSCAN5CA6NGD5 496 aaPredicted RBP15.42■□□□□ 0.06
CROCCP4-201ENST00000457096 A8MX80 341 aa15.42■□□□□ 0.06
CROCCP4-201ENST00000457096 H3BM21 787 aa15.42■□□□□ 0.06
CROCCP4-201ENST00000457096 DFFAO00273 331 aa15.42■□□□□ 0.06
CROCCP4-201ENST00000457096 PRAMEF11O60813 436 aa15.42■□□□□ 0.06
CROCCP4-201ENST00000457096 USP12O75317 370 aa15.42■□□□□ 0.06
CROCCP4-201ENST00000457096 PRB1P04280 392 aa15.42■□□□□ 0.06
CROCCP4-201ENST00000457096 EIF4A3P38919 411 aaKnown RBP15.42■□□□□ 0.06
CROCCP4-201ENST00000457096 THOP1P52888 689 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms