RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 RTKNQ9BST9 563 aa18.57■□□□□ 0.56
SEMA3B-209ENST00000456560 XPR1Q9UBH6 696 aa18.57■□□□□ 0.56
SEMA3B-209ENST00000456560 ZDHHC2Q9UIJ5 367 aa18.57■□□□□ 0.56
SEMA3B-209ENST00000456560 FBXO5Q9UKT4 447 aa18.57■□□□□ 0.56
SEMA3B-209ENST00000456560 NOD1Q9Y239 953 aa18.57■□□□□ 0.56
SEMA3B-209ENST00000456560 USP46P62068 366 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 FAM189BP81408 668 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 SP3Q02447 781 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 BIRC2Q13490 618 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 SEL1L3Q68CR1 1132 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 NEPROQ6NW34 567 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 PDCD6IPQ8WUM4 868 aaKnown RBP18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 IFT43Q96FT9 208 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 ELMO2Q96JJ3 720 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 CNDP1Q96KN2 507 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 RANBP9Q96S59 729 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 FBXO44Q9H4M3 255 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 WDR55Q9H6Y2 383 aaPredicted RBP18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 IL37Q9NZH6 218 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 CDH22Q9UJ99 828 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 PPM1HQ9ULR3 514 aa18.56■□□□□ 0.56
SEMA3B-209ENST00000456560 A0A087X1B8 175 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 POU4F1Q01851 419 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 PEX6Q13608 980 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 CUL3Q13618 768 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 SEPT6Q14141 434 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 NFE2Q16621 373 aaPredicted RBP18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 LSM12Q3MHD2 195 aaKnown RBP18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 MS4A13Q5J8X5 152 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 NOMO2Q5JPE7 1267 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 ZNF470Q6ECI4 717 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 TRAF7Q6Q0C0 670 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 KIAA0408Q6ZU52 694 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 DEFB107AQ8IZN7 70 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 ARHGAP18Q8N392 663 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 CPSF7Q8N684 471 aaKnown RBP18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 PCSK9Q8NBP7 692 aaKnown RBP18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 LINC01599Q8WXQ3 324 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 LENG8Q96PV6 779 aaPredicted RBP18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 TRAPPC9Q96Q05 1148 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 ZNF385DQ9H6B1 395 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 S100A14Q9HCY8 104 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 TMEM248Q9NWD8 314 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 GMIPQ9P107 970 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 VTI1BQ9UEU0 232 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 ARHGAP26Q9UNA1 814 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 GOLGA8QA0A0J9YX86 632 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 GOLGA8OA6NCC3 632 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 GOLGA8NF8WBI6 632 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 ZMPSTE24O75844 475 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 RENBPP51606 427 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 NSUN2Q08J23 767 aaKnown RBP eCLIP18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 CCNIQ14094 377 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 PCSK7Q16549 785 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 SLC24A5Q71RS6 500 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 GATA6Q92908 595 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 HMCESQ96FZ2 354 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 OMDQ99983 421 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 MRPL57Q9BQC6 102 aaKnown RBP18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 ZYG11BQ9C0D3 744 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 SSX2IPQ9Y2D8 614 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 DOCK4Q8N1I0 1966 aa18.55■□□□□ 0.56
SEMA3B-209ENST00000456560 IGLV3-10A0A075B6K4 115 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 HEATR9A2RTY3 570 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 SLCO1B7G3V0H7 640 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 J3KR12 359 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 AURKAO14965 403 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 CNTN5O94779 1100 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 SORBS2O94875 1100 aaKnown RBP18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 MMP2P08253 660 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 PIK3R1P27986 724 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 GRK4P32298 578 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 ERFP50548 548 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 EPHB1P54762 984 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 POLE2P56282 527 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 TNK2Q07912 1038 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 IHHQ14623 411 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 ALFQ53S48 1182 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 FOXB2Q5VYV0 432 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 SPATA6LQ8N4H0 392 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 CD99L2Q8TCZ2 262 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 CCDC28BQ9BUN5 200 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 MRPL46Q9H2W6 279 aaKnown RBP18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 NT5MQ9NPB1 228 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 IGSF5Q9NSI5 407 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 NDE1Q9NXR1 346 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 NPHS1O60500 1241 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 PDE5AO76074 875 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 UBTFL6P0CB48 400 aaPredicted RBP18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 HAPLN1P10915 354 aaPredicted RBP18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 CD1EP15812 388 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 EPHA3P29320 983 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 MAGEA11P43364 429 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 SERPINH1P50454 418 aaKnown RBP18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 SLC10A7Q0GE19 358 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 ASPHQ12797 758 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 MBTPS1Q14703 1052 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 CNSTQ6PJW8 725 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 TFAP2DQ7Z6R9 452 aa18.54■□□□□ 0.56
SEMA3B-209ENST00000456560 TEX26Q8N6G2 289 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms