RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ESRRBO95718 433 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 BCL10O95999 233 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 APOA4P06727 396 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 SNRPB2P08579 225 aaKnown RBP10.4□□□□□ -0.74
CLIP4-208ENST00000456385 IQCF3P0C7M6 154 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 JAK1P23458 1154 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 NMBRP28336 390 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 TTKP33981 857 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 IREB2P48200 963 aaKnown RBP10.4□□□□□ -0.74
CLIP4-208ENST00000456385 CSRP3P50461 194 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 RPS3AP61247 264 aaKnown RBP10.4□□□□□ -0.74
CLIP4-208ENST00000456385 PPIL2Q13356 520 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 PRPSAP1Q14558 356 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 PERM1Q5SV97 790 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 C6orf183Q5T699 404 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 ZC3HC1Q86WB0 502 aaKnown RBP10.4□□□□□ -0.74
CLIP4-208ENST00000456385 ZNF354CQ86Y25 554 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 CDHR1Q96JP9 859 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 TSNARE1Q96NA8 513 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 C11orf84Q9BUA3 381 aaPredicted RBP10.4□□□□□ -0.74
CLIP4-208ENST00000456385 FTHL17Q9BXU8 183 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 DNAI2Q9GZS0 605 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 CDT1Q9H211 546 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 MINDY3Q9H8M7 445 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 FANCEQ9HB96 536 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 CYP4F12Q9HCS2 524 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 UBP1Q9NZI7 540 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 BFARQ9NZS9 450 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 COX16Q9P0S2 106 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 KLHL8Q9P2G9 620 aaPredicted RBP10.4□□□□□ -0.74
CLIP4-208ENST00000456385 MID2Q9UJV3 735 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 SLC30A1Q9Y6M5 507 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 TRPC5OSA6NMA1 111 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 HACD1B0YJ81 288 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 C9JVG2 144 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 NME4O00746 187 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 AQP9O43315 295 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 CNOT3O75175 753 aaKnown RBP10.4□□□□□ -0.74
CLIP4-208ENST00000456385 SRP72O76094 671 aaKnown RBP10.4□□□□□ -0.74
CLIP4-208ENST00000456385 SNAP29O95721 258 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 AHSGP02765 367 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 MT-ND1P03886 318 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 ELK4P28324 431 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 PTPN9P43378 593 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 BFSP2Q13515 415 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 CYBRD1Q53TN4 286 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 ZNF280DQ6N043 979 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 C8orf82Q6P1X6 216 aaPredicted RBP10.4□□□□□ -0.74
CLIP4-208ENST00000456385 CCDC80Q76M96 950 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 TMEM110Q86TL2 294 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 FAM35AQ86V20 835 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 RETREG3Q86VR2 466 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 MFSD6LQ8IWD5 586 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 CADM3Q8N126 398 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 TMCO5AQ8N6Q1 288 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 SCAIQ8N9R8 606 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 OR13F1Q8NGS4 319 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 MAGEE2Q8TD90 523 aaPredicted RBP10.4□□□□□ -0.74
CLIP4-208ENST00000456385 SEPT8Q92599 483 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 FEM1CQ96JP0 617 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 SNX27Q96L92 541 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 GPR78Q96P69 363 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 MPHOSPH6Q99547 160 aaKnown RBP10.4□□□□□ -0.74
CLIP4-208ENST00000456385 GPR22Q99680 433 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 NT5C1AQ9BXI3 368 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 CCDC68Q9H2F9 335 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 ADAMTS10Q9H324 1103 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 POMKQ9H5K3 350 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 PALMDQ9NP74 551 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 GIN1Q9NXP7 522 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 GPRC5DQ9NZD1 345 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 DAPK2Q9UIK4 370 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 ITGB1BP2Q9UKP3 347 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 DGKBQ9Y6T7 804 aa10.4□□□□□ -0.74
CLIP4-208ENST00000456385 TANC1Q9C0D5 1861 aa10.4□□□□□ -0.75
CLIP4-208ENST00000456385 HCRTO43612 131 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 NOL3O60936 208 aaKnown RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 CLPXO76031 633 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 PGK1P00558 417 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 HSPA8P11142 646 aaKnown RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 LCP1P13796 627 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 EEF1B2P24534 225 aaKnown RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 FASP25445 335 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 RCVRNP35243 200 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 ARL4AP40617 200 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 OPRL1P41146 370 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 GLUD2P49448 558 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 CCT8P50990 548 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 PLK1P53350 603 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 CSE1LP55060 971 aaKnown RBP10.39□□□□□ -0.75
CLIP4-208ENST00000456385 ZBTB17Q13105 803 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 SQLEQ14534 574 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 ATP6AP1Q15904 470 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 PKDCCQ504Y2 493 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 DENND6AQ8IWF6 608 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 ZBTB8OSQ8IWT0 167 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 PACRGLQ8N7B6 248 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 NAT16Q8N8M0 369 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 PCYOX1LQ8NBM8 494 aa10.39□□□□□ -0.75
CLIP4-208ENST00000456385 USP33Q8TEY7 942 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms