RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 RNF34Q969K3 372 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 CYFIP2Q96F07 1278 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 PRICKLE1Q96MT3 831 aaPredicted RBP8.04□□□□□ -1.12
LINC01961-201ENST00000449954 LENG8Q96PV6 779 aaPredicted RBP8.04□□□□□ -1.12
LINC01961-201ENST00000449954 DNAI2Q9GZS0 605 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 SDCBP2Q9H190 292 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 TRIT1Q9H3H1 467 aaKnown RBP8.04□□□□□ -1.12
LINC01961-201ENST00000449954 TCEAL2Q9H3H9 227 aaPredicted RBP8.04□□□□□ -1.12
LINC01961-201ENST00000449954 SEMA6CQ9H3T2 930 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 BLOC1S4Q9NUP1 217 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 HMGXB4Q9UGU5 601 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 TLK1Q9UKI8 766 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 GPR34Q9UPC5 381 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 DAAM1Q9Y4D1 1078 aa8.04□□□□□ -1.12
LINC01961-201ENST00000449954 OAS3Q9Y6K5 1087 aaKnown RBP8.04□□□□□ -1.12
LINC01961-201ENST00000449954 TRPM6Q9BX84 2022 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 ELOA3CA0A087WX78 387 aaPredicted RBP8.03□□□□□ -1.12
LINC01961-201ENST00000449954 LOC101059948A0A1B0GTJ6 334 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 ELOA3DA6NLF2 546 aaPredicted RBP8.03□□□□□ -1.12
LINC01961-201ENST00000449954 TOR1BO14657 336 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 INPP4BO15327 924 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 ZW10O43264 779 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 ACSL4O60488 711 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 PHACTR2O75167 634 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 KIF20AO95235 890 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 IGLV3-27P01718 113 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 PDGFAP04085 211 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 CD1EP15812 388 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 UBA7P41226 1012 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 NOP2P46087 812 aaKnown RBP8.03□□□□□ -1.12
LINC01961-201ENST00000449954 TOB1P50616 345 aaPredicted RBP8.03□□□□□ -1.12
LINC01961-201ENST00000449954 PGDP52209 483 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 RNASE9P60153 205 aaKnown RBP8.03□□□□□ -1.12
LINC01961-201ENST00000449954 YPEL5P62699 121 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 PPARDQ03181 441 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 ELOAQ14241 798 aaKnown RBP8.03□□□□□ -1.12
LINC01961-201ENST00000449954 PSMD6Q15008 389 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 SNRNP35Q16560 246 aaKnown RBP8.03□□□□□ -1.12
LINC01961-201ENST00000449954 HIF1AQ16665 826 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 ELOA3BQ3SY89 546 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 NADK2Q4G0N4 442 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 FSCBQ5H9T9 825 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 TPRG1LQ5T0D9 272 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 CERCAMQ5T4B2 595 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 ATP1A1-AS1Q5TC04 95 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 FAXCQ5TGI0 409 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 ARL6IP4Q66PJ3 421 aaKnown RBP8.03□□□□□ -1.12
LINC01961-201ENST00000449954 MMS22LQ6ZRQ5 1243 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 RD3Q7Z3Z2 195 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 GKN2Q86XP6 184 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 APLFQ8IW19 511 aaPredicted RBP8.03□□□□□ -1.12
LINC01961-201ENST00000449954 NECAB1Q8N987 351 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 Q8N9G6 341 aaPredicted RBP8.03□□□□□ -1.12
LINC01961-201ENST00000449954 GPR156Q8NFN8 814 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 ELOA3Q8NG57 546 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 KCTD13Q8WZ19 329 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 PMEPA1Q969W9 287 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 AZIN2Q96A70 460 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 HDAC11Q96DB2 347 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 PPP1R16AQ96I34 528 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 CCDC114Q96M63 670 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 HDAC8Q9BY41 377 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 DUSP16Q9BY84 665 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 SLC25A13Q9UJS0 675 aa8.03□□□□□ -1.12
LINC01961-201ENST00000449954 B4E171 279 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 PRSS44E7EML9 344 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 KPNA3O00505 521 aaPredicted RBP8.02□□□□□ -1.13
LINC01961-201ENST00000449954 RAD51BO15315 384 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 EIF3DO15371 548 aaKnown RBP eCLIP8.02□□□□□ -1.13
LINC01961-201ENST00000449954 NUDT21O43809 227 aaKnown RBP8.02□□□□□ -1.13
LINC01961-201ENST00000449954 CBX6O95503 412 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 ZBED1O96006 694 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 PAK4O96013 591 aaPredicted RBP8.02□□□□□ -1.13
LINC01961-201ENST00000449954 CSTF2P33240 577 aaKnown RBP eCLIP8.02□□□□□ -1.13
LINC01961-201ENST00000449954 TSPAN7P41732 249 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 CASP5P51878 434 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 RPS24P62847 133 aaKnown RBP8.02□□□□□ -1.13
LINC01961-201ENST00000449954 TYRO3Q06418 890 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 SGCGQ13326 291 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 ARHGEF7Q14155 803 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 ZRSR2Q15696 482 aaKnown RBP8.02□□□□□ -1.13
LINC01961-201ENST00000449954 SMTNL2Q2TAL5 461 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 ACCSLQ4AC99 568 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 PRR30Q53SZ7 412 aaPredicted RBP8.02□□□□□ -1.13
LINC01961-201ENST00000449954 RAB41Q5JT25 222 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 PM20D1Q6GTS8 502 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 ERN2Q76MJ5 926 aaKnown RBP8.02□□□□□ -1.13
LINC01961-201ENST00000449954 KDELC2Q7Z4H8 507 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 APCDD1Q8J025 514 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 RCBTB1Q8NDN9 531 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 TMIEQ8NEW7 156 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 FBXO18Q8NFZ0 1043 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 RASSF8Q8NHQ8 419 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 ASB12Q8WXK4 309 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 FEM1CQ96JP0 617 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 KLF6Q99612 283 aaPredicted RBP8.02□□□□□ -1.13
LINC01961-201ENST00000449954 ZPBPQ9BS86 351 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 UBXN6Q9BZV1 441 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 SLAMF7Q9NQ25 335 aa8.02□□□□□ -1.13
LINC01961-201ENST00000449954 SLC39A1Q9NY26 324 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms