RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 ATCAYQ86WG3 371 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 DSELQ8IZU8 1212 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 LGI2Q8N0V4 545 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 POC5Q8NA72 575 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 ACOT12Q8WYK0 555 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 PGM2Q96G03 612 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 PRRG4Q9BZD6 226 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 PLGRKTQ9HBL7 147 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 UPB1Q9UBR1 384 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 CD163L1Q9NR16 1453 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 CPS1P31327 1500 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 JCADQ9P266 1359 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 TBC1D3BA6NDS4 549 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 MANSC4A6NHS7 340 aaPredicted RBP6.73□□□□□ -1.33
USP46-201ENST00000441222 LOC110117498-PIK3R3F6TDL0 507 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 DNAJA2O60884 412 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 GSSP48637 474 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 GRB10Q13322 594 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 GRIK4Q16099 956 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 ZC3H7AQ8IWR0 971 aaKnown RBP6.73□□□□□ -1.33
USP46-201ENST00000441222 RGL4Q8IZJ4 473 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 RASGEF1AQ8N9B8 481 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 ZNF540Q8NDQ6 660 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 PIK3R3Q92569 461 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 C18orf25Q96B23 403 aaPredicted RBP6.73□□□□□ -1.33
USP46-201ENST00000441222 RNPEPL1Q9HAU8 725 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 CDHR5Q9HBB8 845 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 PNPLA3Q9NST1 481 aa6.73□□□□□ -1.33
USP46-201ENST00000441222 A0A0A0MRY4 1105 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 CYB5AP00167 134 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 FMO4P31512 558 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 CDH4P55283 916 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 NRG3P56975 720 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 DNAJC14Q6Y2X3 702 aaPredicted RBP6.72□□□□□ -1.33
USP46-201ENST00000441222 CHSY3Q70JA7 882 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 TAS1R2Q8TE23 839 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 SPATA13Q96N96 652 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 TRMOQ9BU70 441 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 FTHL17Q9BXU8 183 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 VPS45Q9NRW7 570 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 MRPS7Q9Y2R9 242 aaKnown RBP6.72□□□□□ -1.33
USP46-201ENST00000441222 MYH1P12882 1939 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 MYH2Q9UKX2 1941 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 MYH4Q9Y623 1939 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 ABCA9Q8IUA7 1624 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 CXCL11O14625 94 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 FGF19O95750 216 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 ASGR1P07306 291 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 ADSLP30566 484 aaPredicted RBP6.72□□□□□ -1.33
USP46-201ENST00000441222 ATP6V0D1P61421 351 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 TROAPQ12815 778 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 DGCR6Q14129 220 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 DENND5AQ6IQ26 1287 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 CRELD2Q6UXH1 353 aaPredicted RBP6.72□□□□□ -1.33
USP46-201ENST00000441222 CYP4X1Q8N118 509 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 RASSF5Q8WWW0 418 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 EFHD2Q96C19 240 aaPredicted RBP6.72□□□□□ -1.33
USP46-201ENST00000441222 ASB8Q9H765 288 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 CLTCQ00610 1675 aaKnown RBP6.72□□□□□ -1.33
USP46-201ENST00000441222 KDM6BO15054 1643 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 NFASCO94856 1347 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 ARHGEF33A8MVX0 844 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 PRMT5O14744 637 aaPredicted RBP6.72□□□□□ -1.33
USP46-201ENST00000441222 SLC37A4O43826 429 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 GRIA3P42263 894 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 CDK9P50750 372 aaKnown RBP6.72□□□□□ -1.33
USP46-201ENST00000441222 ERVK-24P63145 666 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 ABRQ12979 859 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 TAF5Q15542 800 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 AKIRIN2Q53H80 203 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 PIK3R6Q5UE93 754 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 UNC93AQ86WB7 457 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 BRSK2Q8IWQ3 736 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 TBC1D21Q8IYX1 336 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 SLC4A11Q8NBS3 891 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 BPIFB6Q8NFQ5 453 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 OR10H5Q8NGA6 315 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 PSMA8Q8TAA3 256 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 ELMO1Q92556 727 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 DPF3Q92784 378 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 SPATC1LQ9H0A9 340 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 TKTL2Q9H0I9 626 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 SLC35C2Q9NQQ7 365 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 SAMD4AQ9UPU9 718 aaKnown RBP6.72□□□□□ -1.33
USP46-201ENST00000441222 SIGLEC16A6NMB1 481 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 H0YJX3 145 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 ACKR2O00590 384 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 PLOD3O60568 738 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 CABYRO75952 493 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 SCGNO76038 276 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 PIGNO95427 931 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 ITGA3P26006 1051 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 ASMTP46597 345 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 RAP1GAPP47736 663 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 PRKAG1P54619 331 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 PTPRNQ16849 979 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 LIPMQ5VYY2 423 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 RNF43Q68DV7 783 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 TAPT1Q6NXT6 567 aa6.72□□□□□ -1.33
USP46-201ENST00000441222 CHST15Q7LFX5 561 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms