RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 RAB39AQ14964 217 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 NR1D2Q14995 579 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 AMHR2Q16671 573 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 CDO1Q16878 200 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 MAP7D1Q3KQU3 841 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 ARL13AQ5H913 290 aaPredicted RBP12.02□□□□□ -0.49
LTBR-203ENST00000441074 ZNF484Q5JVG2 852 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 ZNF362Q5T0B9 420 aaPredicted RBP12.02□□□□□ -0.49
LTBR-203ENST00000441074 SCYL2Q6P3W7 929 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 SIX6OS1Q8N1H7 587 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 LINC01465Q8N7H1 131 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 C1orf127Q8N9H9 656 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 CASP10Q92851 521 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 CNDP2Q96KP4 475 aaKnown RBP12.02□□□□□ -0.49
LTBR-203ENST00000441074 TWNKQ96RR1 684 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 TCF12Q99081 682 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 IL22Q9GZX6 179 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 CDT1Q9H211 546 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 GIN1Q9NXP7 522 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 SARDHQ9UL12 918 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 TNFSF13BQ9Y275 285 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 CFAP99D6REC4 459 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 TREHO43280 583 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 CNOT3O75175 753 aaKnown RBP12.02□□□□□ -0.49
LTBR-203ENST00000441074 POLBP06746 335 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 NR2C2P49116 596 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 LIMK2P53671 638 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 CDH8P55286 799 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 CA9Q16790 459 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 LIPMQ5VYY2 423 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 OR6B2Q6IFH4 312 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 TMEM26Q6ZUK4 368 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 FAM183BPQ6ZVS7 135 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 RDH11Q8TC12 318 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 CERS2Q96G23 380 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 AGAP3Q96P47 875 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 OSMRQ99650 979 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 OLFM1Q99784 485 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 TRPC7Q9HCX4 862 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 EIF2B3Q9NR50 452 aaKnown RBP12.02□□□□□ -0.49
LTBR-203ENST00000441074 SMOXQ9NWM0 555 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 ZDHHC2Q9UIJ5 367 aa12.02□□□□□ -0.49
LTBR-203ENST00000441074 PIK3R2O00459 728 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 DLGAP1O14490 977 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 ELNP15502 786 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 CYP2F1P24903 491 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 GRIA4P48058 902 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 FLT3LGP49771 235 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 IRF9Q00978 393 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 GBE1Q04446 702 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 PRKCZQ05513 592 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 INCA1Q0VD86 236 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 STX5Q13190 355 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 ORC1Q13415 861 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 CCDC14Q49A88 953 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 SPANXN3Q5MJ09 141 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 INTS11Q5TA45 600 aaKnown RBP12.01□□□□□ -0.49
LTBR-203ENST00000441074 HEATR6Q6AI08 1181 aaKnown RBP12.01□□□□□ -0.49
LTBR-203ENST00000441074 FSTL4Q6MZW2 842 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 KCNT2Q6UVM3 1135 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 LCLAT1Q6UWP7 414 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 ZYG11AQ6WRX3 759 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 CAMK1DQ8IU85 385 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 PCDH20Q8N6Y1 951 aaKnown RBP12.01□□□□□ -0.49
LTBR-203ENST00000441074 TMEM40Q8WWA1 233 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 DNAJB3Q8WWF6 145 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 TRIB2Q92519 343 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 PPWD1Q96BP3 646 aaKnown RBP12.01□□□□□ -0.49
LTBR-203ENST00000441074 MARK4Q96L34 752 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 C1orf50Q9BV19 199 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 SNRNP25Q9BV90 132 aaKnown RBP12.01□□□□□ -0.49
LTBR-203ENST00000441074 ATAD3AQ9NVI7 634 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 ARMC1Q9NVT9 282 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 NCKIPSDQ9NZQ3 722 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 CD300AQ9UGN4 299 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 HMGXB4Q9UGU5 601 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 TMEM98Q9Y2Y6 226 aa12.01□□□□□ -0.49
LTBR-203ENST00000441074 A0A0A0MRY4 1105 aa12□□□□□ -0.49
LTBR-203ENST00000441074 KCNU1A8MYU2 1149 aa12□□□□□ -0.49
LTBR-203ENST00000441074 J3QRK9 145 aa12□□□□□ -0.49
LTBR-203ENST00000441074 NFICP08651 508 aa12□□□□□ -0.49
LTBR-203ENST00000441074 GNAO1P09471 354 aa12□□□□□ -0.49
LTBR-203ENST00000441074 SNX16P57768 344 aa12□□□□□ -0.49
LTBR-203ENST00000441074 SEPT6Q14141 434 aa12□□□□□ -0.49
LTBR-203ENST00000441074 GLRA4Q5JXX5 417 aa12□□□□□ -0.49
LTBR-203ENST00000441074 ERMP1Q7Z2K6 904 aa12□□□□□ -0.49
LTBR-203ENST00000441074 HACE1Q8IYU2 909 aa12□□□□□ -0.49
LTBR-203ENST00000441074 SLC15A4Q8N697 577 aa12□□□□□ -0.49
LTBR-203ENST00000441074 URGCPQ8TCY9 931 aa12□□□□□ -0.49
LTBR-203ENST00000441074 ACDQ96AP0 544 aa12□□□□□ -0.49
LTBR-203ENST00000441074 FBXL8Q96CD0 374 aa12□□□□□ -0.49
LTBR-203ENST00000441074 HEXIM2Q96MH2 286 aaKnown RBP12□□□□□ -0.49
LTBR-203ENST00000441074 SPATA13Q96N96 652 aa12□□□□□ -0.49
LTBR-203ENST00000441074 TUBA1CQ9BQE3 449 aa12□□□□□ -0.49
LTBR-203ENST00000441074 ADI1Q9BV57 179 aa12□□□□□ -0.49
LTBR-203ENST00000441074 ACE2Q9BYF1 805 aaPredicted RBP12□□□□□ -0.49
LTBR-203ENST00000441074 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
LTBR-203ENST00000441074 ASB7Q9H672 318 aa12□□□□□ -0.49
LTBR-203ENST00000441074 POLR1BQ9H9Y6 1135 aa12□□□□□ -0.49
LTBR-203ENST00000441074 RIC8BQ9NVN3 520 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms