RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 KIAA1958Q8N8K9 716 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 HJURPQ8NCD3 748 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 MAML1Q92585 1016 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 IGSF8Q969P0 613 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 PPP2R3CQ969Q6 453 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 KLHDC7BQ96G42 594 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CRELD1Q96HD1 420 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CELF6Q96J87 481 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 AGAP3Q96P47 875 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CYTH2Q99418 400 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 IL12RB2Q99665 862 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CORO1BQ9BR76 489 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 TRIM56Q9BRZ2 755 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 C17orf80Q9BSJ5 609 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SLC39A8Q9C0K1 460 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SLC25A51Q9H1U9 297 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 EPB41L4BQ9H329 900 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 ATXN3LQ9H3M9 355 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 ACSS3Q9H6R3 686 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CNOT10Q9H9A5 744 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 LRRC40Q9H9A6 602 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 VPS37BQ9H9H4 285 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SP110Q9HB58 689 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 GLOD4Q9HC38 313 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 TRPC7Q9HCX4 862 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 VPS45Q9NRW7 570 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZDHHC7Q9NXF8 308 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 KCNK4Q9NYG8 393 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 BFARQ9NZS9 450 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 MPP6Q9NZW5 540 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SENP1Q9P0U3 644 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 VPS18Q9P253 973 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 BCCIPQ9P287 314 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZC3H7BQ9UGR2 993 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 RSPH14Q9UHP6 348 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 LGALS13Q9UHV8 139 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 IPO11Q9UI26 975 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 MSRAQ9UJ68 235 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 STOML2Q9UJZ1 356 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 AGO1Q9UL18 857 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 NEU3Q9UQ49 428 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 TBC1D30Q9Y2I9 924 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SH3BP1Q9Y3L3 701 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 MFHAS1Q9Y4C4 1052 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SNX10Q9Y5X0 201 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 TEX264Q9Y6I9 313 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 IKBKGQ9Y6K9 419 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 NYNRINQ9P2P1 1898 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CXorf51AA0A1B0GTR3 108 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 TCRBV7S3A2A0A539 114 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 E2F8A0AVK6 867 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 TLDC2A0PJX2 215 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 C2orf78A6NCI8 922 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 HIDE1A8MVS5 230 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 SLC9A3R1O14745 358 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 GRM6O15303 877 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 CCL16O15467 120 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 KDELR3O43731 214 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 CACNG3O60359 315 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 EIF4EBP3O60516 100 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 PRAMEF11O60813 436 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 ADAM11O75078 769 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 CLASP2O75122 1294 aaKnown RBP4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 CNTN5O94779 1100 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 TMEM63AO94886 807 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 WISP1O95388 367 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 KLKB1P03952 638 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 CYBBP04839 570 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 POLBP06746 335 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 CA3P07451 260 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 IRF1P10914 325 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 PGAM1P18669 254 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 NR1D1P20393 614 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 DNAJB1P25685 340 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 PSMB4P28070 264 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 SLC6A4P31645 630 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 GBP2P32456 591 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 AVPR1AP37288 418 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 ELK3P41970 407 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 MSH2P43246 934 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 MAGEA3P43357 314 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 MAGEA10P43363 369 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 GNA12Q03113 381 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 CDH17Q12864 832 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 ILF2Q12905 390 aaKnown RBP4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 MPP3Q13368 585 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 NAB1Q13506 487 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 FRG1Q14331 258 aaKnown RBP4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 RFTN1Q14699 578 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 SHHQ15465 462 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 SLC14A2Q15849 920 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 MPPE1Q53F39 396 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 ALFQ53S48 1182 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 FAM133BQ5BKY9 247 aaKnown RBP4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 RPS26P11Q5JNZ5 115 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 MPP7Q5T2T1 576 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 ARTNQ5T4W7 220 aa4.03□□□□□ -1.76
HMGB1P37-201ENST00000439613 FAXCQ5TGI0 409 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms