RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 EEF2KO00418 725 aaKnown RBP20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 RNF8O76064 485 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 SERPINC1P01008 464 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 CSF2P04141 144 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 SKILP12757 684 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 JUPP14923 745 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 NME1P15531 152 aaKnown RBP20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 ITIH2P19823 946 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 MIPP30301 263 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 HNF1BP35680 557 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 HNRNPKP61978 463 aaKnown RBP eCLIP20.55■□□□□ 0.881e-6■■□□□ 12.4
NCKIPSD-206ENST00000439518 LRRC73Q5JTD7 316 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 TPRG1LQ5T0D9 272 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 HES3Q5TGS1 186 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 AFMIDQ63HM1 303 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 HCAR2Q8TDS4 363 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 RFFLQ8WZ73 363 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 CELF6Q96J87 481 aaKnown RBP20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 EXOC2Q96KP1 924 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 SLC39A8Q9C0K1 460 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 ISCUQ9H1K1 167 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 CBX8Q9HC52 389 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 GPSM3Q9Y4H4 160 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 SCINQ9Y6U3 715 aa20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 SCAMP1O15126 338 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 FFAR2O15552 330 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 PRPSAP2O60256 369 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 MMP20O60882 483 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 LRCH4O75427 683 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 PBX1P40424 430 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 PAPOLAP51003 745 aaKnown RBP20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 SUOXP51687 545 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 KDM7AQ6ZMT4 941 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 RFX8Q6ZV50 586 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 PARGQ86W56 976 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 ARHGAP12Q8IWW6 846 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 ZNF653Q96CK0 615 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 TRIM11Q96F44 468 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 NLGN3Q9NZ94 848 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 KLF15Q9UIH9 416 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 RAXQ9Y2V3 346 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 CELSR3Q9NYQ7 3312 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 LAMA5O15230 3695 aa20.54■□□□□ 0.88
NCKIPSD-206ENST00000439518 CACNA1GO43497 2377 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 TSPAN11A1L157 253 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 NEMP2A6NFY4 417 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 ARHGAP42A6NI28 874 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 MYBL1P10243 752 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 CKMT1AP12532 417 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 ERCC2P18074 760 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 HCAR3P49019 387 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 TARDBPQ13148 414 aaKnown RBP eCLIP20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 PDE1CQ14123 709 aaPredicted RBP20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 GRM3Q14832 879 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 KLHL40Q2TBA0 621 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 HGSNATQ68CP4 663 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 CACTIN-AS1Q8N1I8 211 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 NPWQ8N729 165 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 ZNF548Q8NEK5 533 aaPredicted RBP20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 SUV39H2Q9H5I1 410 aa20.53■□□□□ 0.88
NCKIPSD-206ENST00000439518 LY6G6EA0A0G2JKS1 128 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 A0A1W2PQJ5 194 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 SYCE3A1L190 88 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 K7ESM1 405 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 DAPK3O43293 454 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 TM7SF2O76062 418 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 PIGNO95427 931 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 ALPPL2P10696 532 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 PCK1P35558 622 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 IGFALSP35858 605 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 CSNK1DP48730 415 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 ZNF135P52742 658 aaPredicted RBP20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 FANCCQ00597 558 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 INSM1Q01101 510 aaPredicted RBP20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 EIF2B5Q13144 721 aaKnown RBP20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 TMEM52BQ4KMG9 183 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 HS1BP3Q53T59 392 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 PPP6R3Q5H9R7 873 aaPredicted RBP20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 LUZP1Q86V48 1076 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 FAM181AQ8N9Y4 354 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 CXorf40AQ8TE69 158 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 SYN2Q92777 582 aaPredicted RBP20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 ZNF641Q96N77 438 aaPredicted RBP20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 NCAPGQ9BPX3 1015 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 MRPL47Q9HD33 250 aaKnown RBP20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 CWC15Q9P013 229 aaKnown RBP20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 MYO1AQ9UBC5 1043 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 IPO11Q9UI26 975 aaKnown RBP20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 LHX6Q9UPM6 363 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 CSNK1G3Q9Y6M4 447 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 U3KQA8 63 aa20.52■□□□□ 0.88
NCKIPSD-206ENST00000439518 BUB1BO60566 1050 aaPredicted RBP20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 NEBLO76041 1014 aa20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 RGRP47804 291 aa20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 DAB2P98082 770 aa20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 E2F1Q01094 437 aa20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 ELP6Q0PNE2 266 aa20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 DPYSQ14117 519 aa20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 ACAP1Q15027 740 aa20.51■□□□□ 0.87
NCKIPSD-206ENST00000439518 UGP2Q16851 508 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms