RNA–Protein interactions for RNA: ENST00000437733.5

TRAPPC12-208, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 518 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-208ENST00000437733 SSTR1P30872 391 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 SLC6A4P31645 630 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 STX2P32856 288 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 MSH2P43246 934 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 MAGEA3P43357 314 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 MMP13P45452 471 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 HTR3AP46098 478 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 IRAK1P51617 712 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 GEMP55040 296 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 CDH4P55283 916 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 GEMIN4P57678 1058 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 ERVFC1P60507 584 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 SMAD3P84022 425 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 UBE3AQ05086 875 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 MTM1Q13496 603 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 SPARCL1Q14515 664 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 POLD3Q15054 466 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 TMED2Q15363 201 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 TERF2Q15554 542 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 TUBB8Q3ZCM7 444 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 PARP15Q460N3 678 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 C5orf22Q49AR2 442 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 ALFQ53S48 1182 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 ARSJQ5FYB0 599 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 PPM1LQ5SGD2 360 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 CASC4Q6P4E1 433 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 LRRC8BQ6P9F7 803 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 RFWD3Q6PCD5 774 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 LILRA6Q6PI73 481 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 ZNF534Q76KX8 674 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 CIR1Q86X95 450 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 TDRPQ86YL5 185 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 TREML1Q86YW5 311 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 DENND1CQ8IV53 801 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 IGDCC3Q8IVU1 814 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 ALDH16A1Q8IZ83 802 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 MRPL43Q8N983 215 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 PHC3Q8NDX5 983 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 RIN3Q8TB24 985 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 SPPL3Q8TCT6 385 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 POF1BQ8WVV4 589 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 MRPS31Q92665 395 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 DPF3Q92784 378 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 FATE1Q969F0 183 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 STAMBPL1Q96FJ0 436 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 HMCESQ96FZ2 354 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 SIGLEC10Q96LC7 697 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 CYTH2Q99418 400 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 IL12RB2Q99665 862 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 EBNA1BP2Q99848 306 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 SELENOSQ9BQE4 189 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 WDR83Q9BRX9 315 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 TRIM56Q9BRZ2 755 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 C17orf80Q9BSJ5 609 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 CAPS2Q9BXY5 557 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 RNF38Q9H0F5 515 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 ACSS3Q9H6R3 686 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 NOL6Q9H6R4 1146 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 CNOT10Q9H9A5 744 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 LRRC40Q9H9A6 602 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 SP110Q9HB58 689 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 GLOD4Q9HC38 313 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 NPHS2Q9NP85 383 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 TLR9Q9NR96 1032 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 GKN1Q9NS71 199 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 RBM22Q9NW64 420 aaKnown RBP eCLIP6.43□□□□□ -1.382e-6■■■□□ 15.6
TRAPPC12-208ENST00000437733 PSD3Q9NYI0 1048 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 SAMD15Q9P1V8 674 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 PSMC3IPQ9P2W1 217 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 FETUBQ9UGM5 382 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 IPO11Q9UI26 975 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 SLC24A2Q9UI40 661 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 FOXD3Q9UJU5 478 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 LSM7Q9UK45 103 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 TTLL3Q9Y4R7 772 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 IRAK3Q9Y616 596 aa6.43□□□□□ -1.38
TRAPPC12-208ENST00000437733 CHD5Q8TDI0 1954 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 TRAV19A0A0A6YYK7 116 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 TYW5A2RUC4 315 aaKnown RBP6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 HIDE1A8MVS5 230 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 C5orf67F2Z3F1 127 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 TRDMT1O14717 391 aaKnown RBP6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 CCL16O15467 120 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 TSPAN3O60637 253 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 CLDN11O75508 207 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 RFPL1O75677 317 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 SUN1O94901 812 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 RB1P06400 928 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 MYL4P12829 197 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 HDCP19113 662 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 DNAJB1P25685 340 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 MGAT1P26572 445 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 CALRP27797 417 aaKnown RBP6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 GABRR2P28476 465 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 OR1E1P30953 314 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 CD68P34810 354 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 GRIA1P42261 906 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 IFNAR2P48551 515 aa6.42□□□□□ -1.38
TRAPPC12-208ENST00000437733 NPY2RP49146 381 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms