RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 RAMP2O60895 175 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 VAPBO95292 243 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 PAPSS2O95340 614 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 ELF1P32519 619 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 ARCN1P48444 511 aaKnown RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 WNT3AP56704 352 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 ABCE1P61221 599 aaKnown RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 POLD3Q15054 466 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 KDELC1Q6UW63 502 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 RAPH1Q70E73 1250 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 TFAP2DQ7Z6R9 452 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 MIB1Q86YT6 1006 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 ARHGAP24Q8N264 748 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 MRPL43Q8N983 215 aaKnown RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 PDZD8Q8NEN9 1154 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 OR6Y1Q8NGX8 325 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 OVCA2Q8WZ82 227 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 RILPQ96NA2 401 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 NMUR2Q9GZQ4 415 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 MMADHCQ9H3L0 296 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 ATP13A1Q9HD20 1204 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 SLC39A10Q9ULF5 831 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 RWDD3Q9Y3V2 267 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 NUMBLQ9Y6R0 609 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 CARNS1A5YM72 827 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 GYG2O15488 501 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 TLR5O60602 858 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 TRIM13O60858 407 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 ABLIM3O94929 683 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 KITP10721 976 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 ALOX15P16050 662 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 ATF6P18850 670 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 TUFMP49411 452 aaKnown RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 SERPINH1P50454 418 aaKnown RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 KPNA2P52292 529 aaKnown RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 LAMB3Q13751 1172 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 USP10Q14694 798 aaKnown RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 GRM3Q14832 879 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 SMAD1Q15797 465 aaKnown RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 ALFQ53S48 1182 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 WASHC2DQ5SRD0 308 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 LMNTD2Q8IXW0 634 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 AZIN2Q96A70 460 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 PABPC5Q96DU9 382 aaKnown RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 RPRD1AQ96P16 312 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 KLHL5Q96PQ7 755 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 CD248Q9HCU0 757 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 NT5MQ9NPB1 228 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 ARL8BQ9NVJ2 186 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 DNAJC28Q9NX36 388 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 MARCOQ9UEW3 520 aaPredicted RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 AFF4Q9UHB7 1163 aaKnown RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 APOBEC2Q9Y235 224 aaKnown RBP12.06□□□□□ -0.48
CTCFL-209ENST00000433949 DNAJC16Q9Y2G8 782 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 UNC80Q8N2C7 3258 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 PLXNA4Q9HCM2 1894 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 CAPN14A8MX76 684 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 C5orf67F2Z3F1 127 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 TBX18O95935 607 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 AHSGP02765 367 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 CRABP2P29373 138 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 HK2P52789 917 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 ERVK-21P61565 698 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 ITGA9Q13797 1035 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 RAB33AQ14088 237 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 TSNAXIP1Q2TAA8 658 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 RAP1GAP2Q684P5 730 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 ESRP1Q6NXG1 681 aaKnown RBP12.05□□□□□ -0.48
CTCFL-209ENST00000433949 GALNT7Q86SF2 657 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 ALYREFQ86V81 257 aaKnown RBP12.05□□□□□ -0.48
CTCFL-209ENST00000433949 LONP2Q86WA8 852 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 PLD6Q8N2A8 252 aaKnown RBP12.05□□□□□ -0.48
CTCFL-209ENST00000433949 C2CD4AQ8NCU7 369 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-209ENST00000433949 PEX13Q92968 403 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 ZNF599Q96NL3 588 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-209ENST00000433949 HSFX1Q9UBD0 423 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 ZNF212Q9UDV6 495 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 ACOT9Q9Y305 439 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 GBF1Q92538 1859 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 SLC38A8A6NNN8 435 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 F5H5T6 163 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 G3V2L1 256 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 H3BNC9 293 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 ITM2AO43736 263 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 CNTN5O94779 1100 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 STMN1P16949 149 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 OR1E1P30953 314 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 ATP5C1P36542 298 aaKnown RBP12.05□□□□□ -0.48
CTCFL-209ENST00000433949 RAB10P61026 200 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 ITKQ08881 620 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 SLC10A7Q0GE19 358 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 TWF1Q12792 350 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 ASPHQ12797 758 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 SERINC3Q13530 473 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 CNGA3Q16281 694 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 C5orf22Q49AR2 442 aa12.05□□□□□ -0.48
CTCFL-209ENST00000433949 HSF5Q4G112 596 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-209ENST00000433949 SNX30Q5VWJ9 437 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms