RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 TIMP2P16035 220 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 CDK11BP21127 795 aaKnown RBP11.93□□□□□ -0.5
HDAC4-202ENST00000430200 PSMA2P25787 234 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 IL1R2P27930 398 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 PRKCIP41743 596 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 RHOAP61586 193 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 SNRPD1P62314 119 aaKnown RBP11.93□□□□□ -0.5
HDAC4-202ENST00000430200 ZNF211Q13398 564 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-202ENST00000430200 PDE1CQ14123 709 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-202ENST00000430200 ASIC2Q16515 512 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 AFMIDQ63HM1 303 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 HGSNATQ68CP4 663 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 GDPD4Q6W3E5 623 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 VPS36Q86VN1 386 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 ZNF354CQ86Y25 554 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 ANKRD20A12PQ8NF67 263 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 HNRNPLLQ8WVV9 542 aaKnown RBP11.93□□□□□ -0.5
HDAC4-202ENST00000430200 CENPTQ96BT3 561 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 APOLD1Q96LR9 279 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 GDAP1L1Q96MZ0 367 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 EPAS1Q99814 870 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 SLC39A8Q9C0K1 460 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 TMEM51Q9NW97 253 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 PCSK1NQ9UHG2 260 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 BOD1L1Q8NFC6 3051 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 K7ESM1 405 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 PRAMEF11O60813 436 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 GCATO75600 419 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 IGSF6O95976 241 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 CSF2P04141 144 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 GM2AP17900 193 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 ITPKBP27987 946 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 MIPP30301 263 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 PBX1P40424 430 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 GEMIN4P57678 1058 aaKnown RBP11.92□□□□□ -0.5
HDAC4-202ENST00000430200 TPI1P60174 286 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 DPYSQ14117 519 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 IRF4Q15306 451 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 TCEA2Q15560 299 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 PARP15Q460N3 678 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 DCUN1D2Q6PH85 259 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 PARGQ86W56 976 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 PELI3Q8N2H9 469 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 PDCD7Q8N8D1 485 aaKnown RBP11.92□□□□□ -0.5
HDAC4-202ENST00000430200 DCBLD1Q8N8Z6 715 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 TSEN2Q8NCE0 465 aaKnown RBP11.92□□□□□ -0.5
HDAC4-202ENST00000430200 ZNF653Q96CK0 615 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 LENG8Q96PV6 779 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-202ENST00000430200 LRRC61Q9BV99 259 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 DHX35Q9H5Z1 703 aaKnown RBP11.92□□□□□ -0.5
HDAC4-202ENST00000430200 ETNK2Q9NVF9 386 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 MYO6Q9UM54 1294 aa11.92□□□□□ -0.5
HDAC4-202ENST00000430200 TENM4Q6N022 2769 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 A0A1W2PQC6 194 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 TTC24A2A3L6 582 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-202ENST00000430200 SCAMP1O15126 338 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 FGF10O15520 208 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-202ENST00000430200 TSPAN6O43657 245 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 MAGEC1O60732 1142 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 POP4O95707 220 aaKnown RBP11.91□□□□□ -0.5
HDAC4-202ENST00000430200 CKMT1AP12532 417 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 MMP12P39900 470 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 ZNF165P49910 485 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 PAPOLAP51003 745 aaKnown RBP11.91□□□□□ -0.5
HDAC4-202ENST00000430200 YBEYP58557 167 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-202ENST00000430200 RALGDSQ12967 914 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 SMTNL2Q2TAL5 461 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 DEFB133Q30KQ1 61 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 INO80DQ53TQ3 878 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-202ENST00000430200 CDCP2Q5VXM1 449 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 GUSBP11Q6P575 273 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 CRTC1Q6UUV9 634 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 RFX8Q6ZV50 586 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 PDZD3Q86UT5 571 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 LUZP1Q86V48 1076 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 CAMK1DQ8IU85 385 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 DENND6BQ8NEG7 585 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 RAB7BQ96AH8 199 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 NXPE2Q96DL1 559 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 LRIG1Q96JA1 1093 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 FEM1CQ96JP0 617 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 BTBD6Q96KE9 485 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 OSBPL1AQ9BXW6 950 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 CLPBQ9H078 707 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 RETREG1Q9H6L5 497 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 PCDH12Q9NPG4 1184 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 NLGN3Q9NZ94 848 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 AIPL1Q9NZN9 384 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 CWC15Q9P013 229 aaKnown RBP11.91□□□□□ -0.5
HDAC4-202ENST00000430200 UBA2Q9UBT2 640 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-202ENST00000430200 CNOT8Q9UFF9 292 aaKnown RBP11.91□□□□□ -0.5
HDAC4-202ENST00000430200 HPCAL4Q9UM19 191 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 HS3ST3A1Q9Y663 406 aa11.91□□□□□ -0.5
HDAC4-202ENST00000430200 A0A087WV48 116 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 SYCE3A1L190 88 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 ZSCAN5CA6NGD5 496 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-202ENST00000430200 GOLGA6L22H0YM25 854 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 EEF2KO00418 725 aaKnown RBP11.9□□□□□ -0.5
HDAC4-202ENST00000430200 NEMP1O14524 444 aa11.9□□□□□ -0.5
HDAC4-202ENST00000430200 BRINP1O60477 761 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms