RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 AGKQ53H12 422 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 LINGO4Q6UY18 593 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 RNF111Q6ZNA4 994 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 TIFABQ6ZNK6 161 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 DDIASQ8IXT1 998 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 ENDOVQ8N8Q3 282 aaKnown RBP13.47□□□□□ -0.25
MCF2L-213ENST00000421756 TUBGCP5Q96RT8 1024 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 RHOJQ9H4E5 214 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 APPL1Q9UKG1 709 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 CDYLQ9Y232 598 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 BTRCQ9Y297 605 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 PLXNA1Q9UIW2 1896 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 DUSP11O75319 330 aaKnown RBP13.47□□□□□ -0.25
MCF2L-213ENST00000421756 GLDCP23378 1020 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 CD151P48509 253 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 NPY2RP49146 381 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 CDC16Q13042 620 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 FAM83EQ2M2I3 478 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 TRMT5Q32P41 509 aaKnown RBP13.47□□□□□ -0.25
MCF2L-213ENST00000421756 PLA2G4EQ3MJ16 856 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 PRSS55Q6UWB4 352 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-213ENST00000421756 OR7D4Q8NG98 312 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 ACMSDQ8TDX5 336 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 ABCG8Q9H221 673 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 CATSPERBQ9H7T0 1116 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 OXSMQ9NWU1 459 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 NCKIPSDQ9NZQ3 722 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 TRHDEQ9UKU6 1024 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 AAR2Q9Y312 384 aaKnown RBP13.47□□□□□ -0.25
MCF2L-213ENST00000421756 ITGB6P18564 788 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 ARNTP27540 789 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 DSG1Q02413 1049 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 CYLC2Q14093 348 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-213ENST00000421756 CCNIQ14094 377 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 KIF19Q2TAC6 998 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 XKR4Q5GH76 650 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 FSCBQ5H9T9 825 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 KCTD11Q693B1 232 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 IFNL1Q8IU54 200 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 DIS3LQ8TF46 1054 aaKnown RBP13.47□□□□□ -0.25
MCF2L-213ENST00000421756 PPWD1Q96BP3 646 aaKnown RBP13.47□□□□□ -0.25
MCF2L-213ENST00000421756 IFT43Q96FT9 208 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 MRGPRX2Q96LB1 330 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 ACBD6Q9BR61 282 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 ABCC13Q9NSE7 274 aa13.47□□□□□ -0.25
MCF2L-213ENST00000421756 HDAC3O15379 428 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 ANXA9O76027 345 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 SBK3P0C264 359 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 PAOXQ6QHF9 649 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 DSELQ8IZU8 1212 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 NTAN1Q96AB6 310 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 CNBD2Q96M20 576 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 KCNA7Q96RP8 456 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 EIF2B3Q9NR50 452 aaKnown RBP13.46□□□□□ -0.25
MCF2L-213ENST00000421756 PTCH2Q9Y6C5 1203 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 NCAM2O15394 837 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 KCNC1P48547 511 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 COG7P83436 770 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 LIPMQ5VYY2 423 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 BHLHE22Q8NFJ8 381 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-213ENST00000421756 DNAJC1Q96KC8 554 aaKnown RBP13.46□□□□□ -0.25
MCF2L-213ENST00000421756 GBP5Q96PP8 586 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 S100A14Q9HCY8 104 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 GKN1Q9NS71 199 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 GIT1Q9Y2X7 761 aa13.46□□□□□ -0.25
MCF2L-213ENST00000421756 RPS24P62847 133 aaKnown RBP13.46□□□□□ -0.26
MCF2L-213ENST00000421756 GK3PQ14409 553 aa13.46□□□□□ -0.26
MCF2L-213ENST00000421756 IHHQ14623 411 aa13.46□□□□□ -0.26
MCF2L-213ENST00000421756 PFKFB4Q16877 469 aa13.46□□□□□ -0.26
MCF2L-213ENST00000421756 FBXL22Q6P050 247 aa13.46□□□□□ -0.26
MCF2L-213ENST00000421756 NET1Q7Z628 596 aaPredicted RBP13.46□□□□□ -0.26
MCF2L-213ENST00000421756 ZNF598Q86UK7 904 aaKnown RBP13.46□□□□□ -0.26
MCF2L-213ENST00000421756 ICA1LQ8NDH6 482 aa13.46□□□□□ -0.26
MCF2L-213ENST00000421756 GPR62Q9BZJ7 368 aa13.46□□□□□ -0.26
MCF2L-213ENST00000421756 PCDHGB4Q9UN71 923 aa13.46□□□□□ -0.26
MCF2L-213ENST00000421756 PCDHGB5Q9Y5G0 923 aa13.46□□□□□ -0.26
MCF2L-213ENST00000421756 PLXNB2O15031 1838 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 A0A0U1RQF3 1178 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 ZNF195O14628 629 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 BMP1P13497 986 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 PSEN1P49768 467 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
MCF2L-213ENST00000421756 ZNF235Q14590 738 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 DENND5AQ6IQ26 1287 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 EPGNQ6UW88 154 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 RASAL3Q86YV0 1011 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-213ENST00000421756 ZNF512Q96ME7 567 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-213ENST00000421756 ECSITQ9BQ95 431 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 MARCH2Q9P0N8 246 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 FAM8A1Q9UBU6 413 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 LRCH1Q9Y2L9 728 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 USP34Q70CQ2 3546 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 CBX4O00257 560 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 MATN3O15232 486 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 RNASEH1O60930 286 aaKnown RBP13.45□□□□□ -0.26
MCF2L-213ENST00000421756 MPOP05164 745 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 GFAPP14136 432 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 AOC1P19801 751 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 MS4A2Q01362 244 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms