RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CCDC86Q9H6F5 360 aaKnown RBP15.3■□□□□ 0.04
UBXN4-203ENST00000416538 CATSPERBQ9H7T0 1116 aa15.3■□□□□ 0.04
UBXN4-203ENST00000416538 TSPAN11A1L157 253 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 TRABD2BA6NFA1 517 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 EEF2KO00418 725 aaKnown RBP15.29■□□□□ 0.04
UBXN4-203ENST00000416538 TSPAN6O43657 245 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 PRAMEF11O60813 436 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 NEBLO76041 1014 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 IGSF6O95976 241 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 GZMAP12544 262 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 TIMP2P16035 220 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 PFN3P60673 137 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 FANCCQ00597 558 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 FILIP1LQ4L180 1135 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 INO80DQ53TQ3 878 aaPredicted RBP15.29■□□□□ 0.04
UBXN4-203ENST00000416538 TXNRD3NBQ6F5E7 133 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 GDPD4Q6W3E5 623 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 RFX8Q6ZV50 586 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 NYAP1Q6ZVC0 841 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 OR4C6Q8NH72 309 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 FNIP1Q8TF40 1166 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 RAB7BQ96AH8 199 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 FEM1CQ96JP0 617 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 OSBPL1AQ9BXW6 950 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 UBA2Q9UBT2 640 aaPredicted RBP15.29■□□□□ 0.04
UBXN4-203ENST00000416538 RAXQ9Y2V3 346 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 HS3ST3A1Q9Y663 406 aa15.29■□□□□ 0.04
UBXN4-203ENST00000416538 ARHGEF17Q96PE2 2063 aaPredicted RBP15.28■□□□□ 0.04
UBXN4-203ENST00000416538 SPTY2D1-AS1A0A0U1RR47 76 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 MUSKO15146 869 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 BUB1BO60566 1050 aaPredicted RBP15.28■□□□□ 0.04
UBXN4-203ENST00000416538 PRKCGP05129 697 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 PYGBP11216 843 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 NME1P15531 152 aaKnown RBP15.28■□□□□ 0.04
UBXN4-203ENST00000416538 CKMT2P17540 419 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 ERCC2P18074 760 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 ACP1P24666 158 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 SEMG2Q02383 582 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 CYP4F3Q08477 520 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 EIF2B5Q13144 721 aaKnown RBP15.28■□□□□ 0.04
UBXN4-203ENST00000416538 DPYSQ14117 519 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 KLHL40Q2TBA0 621 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 FIGNQ5HY92 759 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 ERMARDQ5T6L9 678 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 RBFAQ8N0V3 343 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 TP53I13Q8NBR0 393 aaPredicted RBP15.28■□□□□ 0.04
UBXN4-203ENST00000416538 DENND6BQ8NEG7 585 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 ZNF548Q8NEK5 533 aaPredicted RBP15.28■□□□□ 0.04
UBXN4-203ENST00000416538 CASKIN2Q8WXE0 1202 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 CENPTQ96BT3 561 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 WRAP53Q9BUR4 548 aaKnown RBP15.28■□□□□ 0.04
UBXN4-203ENST00000416538 ISCUQ9H1K1 167 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 TCEAL2Q9H3H9 227 aaPredicted RBP15.28■□□□□ 0.04
UBXN4-203ENST00000416538 MBNL1Q9NR56 388 aaKnown RBP15.28■□□□□ 0.04
UBXN4-203ENST00000416538 DNAJC28Q9NX36 388 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 CWC15Q9P013 229 aaKnown RBP15.28■□□□□ 0.04
UBXN4-203ENST00000416538 MYO1AQ9UBC5 1043 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 DKK3Q9UBP4 350 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 DKK4Q9UBT3 224 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 COQ6Q9Y2Z9 468 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 GPSM3Q9Y4H4 160 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 PTPRQQ9UMZ3 2332 aa15.28■□□□□ 0.04
UBXN4-203ENST00000416538 NEMP1O14524 444 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 MMP20O60882 483 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 SERPINC1P01008 464 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 HTR7P34969 479 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 PAPOLAP51003 745 aaKnown RBP15.27■□□□□ 0.04
UBXN4-203ENST00000416538 NDST2P52849 883 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 INSM1Q01101 510 aaPredicted RBP15.27■□□□□ 0.04
UBXN4-203ENST00000416538 ZNF211Q13398 564 aaPredicted RBP15.27■□□□□ 0.04
UBXN4-203ENST00000416538 PDE1CQ14123 709 aaPredicted RBP15.27■□□□□ 0.04
UBXN4-203ENST00000416538 SMTNL2Q2TAL5 461 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 PPP6R3Q5H9R7 873 aaPredicted RBP15.27■□□□□ 0.04
UBXN4-203ENST00000416538 PPP1R2P3Q6NXS1 205 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 VPS36Q86VN1 386 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 TMPRSS12Q86WS5 348 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 CPNE8Q86YQ8 564 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 TSEN2Q8NCE0 465 aaKnown RBP15.27■□□□□ 0.04
UBXN4-203ENST00000416538 ASB12Q8WXK4 309 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 BTBD6Q96KE9 485 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 LENG8Q96PV6 779 aaPredicted RBP15.27■□□□□ 0.04
UBXN4-203ENST00000416538 EDEM3Q9BZQ6 932 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 ETNK2Q9NVF9 386 aa15.27■□□□□ 0.04
UBXN4-203ENST00000416538 CSF2P04141 144 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 GYPCP04921 128 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 C1SP09871 688 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 HOXB3P14651 431 aaPredicted RBP15.26■□□□□ 0.03
UBXN4-203ENST00000416538 RABIFP47224 123 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 IRF4Q15306 451 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 TDRD12Q587J7 1177 aaKnown RBP15.26■□□□□ 0.03
UBXN4-203ENST00000416538 KCTD16Q68DU8 428 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 TTC7BQ86TV6 843 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 PARGQ86W56 976 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 RFFLQ8WZ73 363 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 ARHGEF26Q96DR7 871 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 IFT43Q96FT9 208 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 APOLD1Q96LR9 279 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 CPEB1Q9BZB8 566 aaKnown RBP15.26■□□□□ 0.03
UBXN4-203ENST00000416538 THAP2Q9H0W7 228 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 PCDH12Q9NPG4 1184 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms