RNA–Protein interactions for RNA: ENST00000416081.5

SSFA2-204, Transcript of Sperm-specific antigen 2, humanhuman

TSL 1 (best)

Gene SSFA2, Length 5,067 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-204ENST00000416081 HMBOX1Q6NT76 420 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 TAS2R42Q7RTR8 314 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 PLD3Q8IV08 490 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 CPNE9Q8IYJ1 553 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 TBC1D21Q8IYX1 336 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 DCPSQ96C86 337 aaKnown RBP7.37□□□□□ -1.23
SSFA2-204ENST00000416081 SLC45A3Q96JT2 553 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 ALPK1Q96QP1 1244 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 DOK1Q99704 481 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 SLX1AQ9BQ83 275 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 HERC2P3Q9BVR0 1158 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 MROQ9BYG7 248 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 C2orf40Q9H1Z8 148 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 CYP4F12Q9HCS2 524 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 DUS2Q9NX74 493 aaKnown RBP7.37□□□□□ -1.23
SSFA2-204ENST00000416081 V9GYQ6 96 aa7.37□□□□□ -1.23
SSFA2-204ENST00000416081 CCDC78A2IDD5 438 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 USP12O75317 370 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 MBL2P11226 248 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 HNRNPLP14866 589 aaKnown RBP eCLIP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 HNRNPFP52597 415 aaKnown RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 RAB44Q7Z6P3 723 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 ANKRD13BQ86YJ7 626 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 FAM149B1Q96BN6 582 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 FEM1CQ96JP0 617 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 UHRF1Q96T88 793 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 OMDQ99983 421 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 RMND5AQ9H871 391 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 CNGB3Q9NQW8 809 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 RNF146Q9NTX7 359 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 DDX28Q9NUL7 540 aaKnown RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 VPS51Q9UID3 782 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 TMEM233B4DJY2 109 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 PSMD11O00231 422 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 CHEK2O96017 543 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 MT-CO1P00395 513 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 PAMP19021 973 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 ATP5F1P24539 256 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 EPHX2P34913 555 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 SOX11P35716 441 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 OPRL1P41146 370 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 GTF2A2P52657 109 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 GRSF1Q12849 480 aaKnown RBP eCLIP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 OXA1LQ15070 435 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 ZIK1Q3SY52 487 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 FAM117BQ6P1L5 589 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 DCLRE1AQ6PJP8 1040 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 CHST15Q7LFX5 561 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 CCDC103Q8IW40 242 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 FSTL5Q8N475 847 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 RNF149Q8NC42 400 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 ABHD11Q8NFV4 315 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 CLEC4DQ8WXI8 215 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 MOCOSQ96EN8 888 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 P2RY11Q96G91 374 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 CSPG4P5Q96PW8 444 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 HAPLN2Q9GZV7 340 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 INTS10Q9NVR2 710 aaKnown RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 MTRRQ9UBK8 725 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 TBKBP1A7MCY6 615 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 SDHDO14521 159 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 DYNC1LI2O43237 492 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 POLR2EP19388 210 aaKnown RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 GNL1P36915 607 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 HPCAL1P37235 193 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 GPD2P43304 727 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 NPY2RP49146 381 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 ATP6V0D1P61421 351 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 IGBP1P78318 339 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 DNASE1L3Q13609 305 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 GRM3Q14832 879 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 ATP6AP1Q15904 470 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 BCL2A1Q16548 175 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 PHKG1Q16816 387 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 RSBN1Q5VWQ0 802 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 IFNLR1Q8IU57 520 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 PSTKQ8IV42 348 aaKnown RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 SLC41A1Q8IVJ1 513 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 STON2Q8WXE9 905 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 DUS3LQ96G46 650 aaKnown RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 SEPHS2Q99611 448 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 MRPL57Q9BQC6 102 aaKnown RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 RHOJQ9H4E5 214 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 DTLQ9NZJ0 730 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 SNX9Q9Y5X1 595 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 MYH14Q7Z406 1995 aaKnown RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 AREL1O15033 823 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 SNPHO15079 494 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 TRIM24O15164 1050 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 ABCB7O75027 752 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 APOA1P02647 267 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 TOP3AQ13472 1001 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 HSDL1Q3SXM5 330 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 IRAK1BP1Q5VVH5 260 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 THAP5Q7Z6K1 395 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 C7orf31Q8N865 590 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 BEST2Q8NFU1 509 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 SH3YL1Q96HL8 342 aaPredicted RBP7.36□□□□□ -1.23
SSFA2-204ENST00000416081 SEZ6LQ9BYH1 1024 aa7.36□□□□□ -1.23
SSFA2-204ENST00000416081 ELOVL4Q9GZR5 314 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms