RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 GARSP41250 739 aaKnown RBP17.38■□□□□ 0.37
PTPRC-206ENST00000413409 NAB1Q13506 487 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 TPGS2Q68CL5 300 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 ITPRIPL1Q6GPH6 555 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 C6orf89Q6UWU4 347 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 UNC5AQ6ZN44 842 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 RGS9BPQ6ZS82 235 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 SLC26A11Q86WA9 606 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 LRRC34Q8IZ02 419 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 CHCHD4Q8N4Q1 142 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 CCDC33Q8N5R6 958 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 LZTR1Q8N653 840 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 LEMD2Q8NC56 503 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 MGARPQ8TDB4 240 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 TBC1D31Q96DN5 1066 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 SEC16BQ96JE7 1060 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 GBA3Q9H227 469 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 CATSPERBQ9H7T0 1116 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 PLAC1Q9HBJ0 212 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 FBRSL1Q9HCM7 1045 aaKnown RBP17.38■□□□□ 0.37
PTPRC-206ENST00000413409 FAM169AQ9Y6X4 670 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 APC2O95996 2303 aa17.38■□□□□ 0.37
PTPRC-206ENST00000413409 FAM159BA6NKW6 160 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 FOXO6A8MYZ6 492 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 ATG13O75143 517 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 RTN3O95197 1032 aaPredicted RBP17.37■□□□□ 0.37
PTPRC-206ENST00000413409 VNN2O95498 520 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 ASMTLO95671 621 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 SLC2A3P11169 496 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 SIM1P81133 766 aaPredicted RBP17.37■□□□□ 0.37
PTPRC-206ENST00000413409 PPARDQ03181 441 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 SPARCL1Q14515 664 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 ITIH4Q14624 930 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 LRRC14Q15048 493 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 KBTBD12Q3ZCT8 623 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 SYCP2LQ5T4T6 812 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 ZNF449Q6P9G9 518 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 PIGWQ7Z7B1 504 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 PIP4P1Q86T03 277 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 KLHDC8BQ8IXV7 354 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 STAMBPL1Q96FJ0 436 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 SPATA17Q96L03 361 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 TSGA13Q96PP4 275 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 NMUR1Q9HB89 426 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 CACNA2D2Q9NY47 1150 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 SEPT10Q9P0V9 454 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 SAMD15Q9P1V8 674 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 KLHL8Q9P2G9 620 aaPredicted RBP17.37■□□□□ 0.37
PTPRC-206ENST00000413409 AFF4Q9UHB7 1163 aaKnown RBP17.37■□□□□ 0.37
PTPRC-206ENST00000413409 ACACAQ13085 2346 aa17.37■□□□□ 0.37
PTPRC-206ENST00000413409 OTOL1A6NHN0 477 aaPredicted RBP17.36■□□□□ 0.37
PTPRC-206ENST00000413409 WASH4PA8MWX3 477 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 KCNU1A8MYU2 1149 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 TM9SF1O15321 606 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 PAGE1O75459 146 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 KIAA0754O94854 1291 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 PRAMEF12O95522 483 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 AP2A1O95782 977 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 EGFP01133 1207 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 VIMP08670 466 aaKnown RBP17.36■□□□□ 0.37
PTPRC-206ENST00000413409 PSEN1P49768 467 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 GPR17Q13304 367 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 MTM1Q13496 603 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 ITPRIPL2Q3MIP1 535 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 NUGGCQ68CJ6 796 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 PMS2CLQ68D20 193 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 RNF19BQ6ZMZ0 732 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 LRRC6Q86X45 466 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 CCDC197Q8NCU1 140 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 SLC39A13Q96H72 371 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 CEP295NLQ96MC4 621 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 OLA1Q9NTK5 396 aaKnown RBP17.36■□□□□ 0.37
PTPRC-206ENST00000413409 CLIC5Q9NZA1 410 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 TLR6Q9Y2C9 796 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 SNX10Q9Y5X0 201 aa17.36■□□□□ 0.37
PTPRC-206ENST00000413409 MTMR11A4FU01 709 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 SDR42E2A6NKP2 422 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 OAS1P00973 400 aaKnown RBP17.35■□□□□ 0.37
PTPRC-206ENST00000413409 PGAM1P18669 254 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 SERPINB9P50453 376 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 WDR4P57081 412 aaKnown RBP17.35■□□□□ 0.37
PTPRC-206ENST00000413409 CORO7P57737 925 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 FRG1Q14331 258 aaKnown RBP17.35■□□□□ 0.37
PTPRC-206ENST00000413409 ACBD5Q5T8D3 534 aaPredicted RBP17.35■□□□□ 0.37
PTPRC-206ENST00000413409 TTC39BQ5VTQ0 682 aaPredicted RBP17.35■□□□□ 0.37
PTPRC-206ENST00000413409 GAREM2Q75VX8 874 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 TAX1BP1Q86VP1 789 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 LRRC49Q8IUZ0 686 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 TP53INP2Q8IXH6 220 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 C4orf33Q8N1A6 199 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 PDCD7Q8N8D1 485 aaKnown RBP17.35■□□□□ 0.37
PTPRC-206ENST00000413409 MTBPQ96DY7 904 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 C1orf74Q96LT6 269 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 PPP1R2P1Q96PQ5 205 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 CRISPLD1Q9H336 500 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 KIF9Q9HAQ2 790 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 MKS1Q9NXB0 559 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 GMIPQ9P107 970 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 EBF1Q9UH73 591 aa17.35■□□□□ 0.37
PTPRC-206ENST00000413409 YIPF1Q9Y548 306 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms