RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 ADRA1DP25100 572 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 ARNTP27540 789 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 GP5P40197 560 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 SLC18A2Q05940 514 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 CDK18Q07002 472 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 FRG1Q14331 258 aaKnown RBP17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 ITIH4Q14624 930 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 CNGA3Q16281 694 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 RNF187Q5TA31 235 aaPredicted RBP17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 FYB2Q5VWT5 728 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 LVRNQ6Q4G3 990 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 TMC5Q6UXY8 1006 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 STRA8Q7Z7C7 330 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 MICALL1Q8N3F8 863 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 VN1R2Q8NFZ6 395 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 CKAP2Q8WWK9 683 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 SGSM3Q96HU1 749 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 APOPT1Q96IL0 206 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 FEM1CQ96JP0 617 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 TLE6Q9H808 572 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 SCUBE2Q9NQ36 999 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 TREX1Q9NSU2 369 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 PCMTD2Q9NV79 361 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 LHX3Q9UBR4 397 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 PRKAG3Q9UGI9 489 aa17.74■□□□□ 0.43
LRPPRC-203ENST00000409946 INSIG1O15503 277 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 VAPBO95292 243 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 NEK3P51956 506 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 TTC31Q49AM3 519 aaPredicted RBP17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 PPP2R2DQ66LE6 453 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 ZNF449Q6P9G9 518 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 CDHR3Q6ZTQ4 885 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 TMEM25Q86YD3 366 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 LRRC34Q8IZ02 419 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 DCAF4L2Q8NA75 395 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 SMG7Q92540 1137 aaKnown RBP17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 MTBPQ96DY7 904 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 CPNE1Q99829 537 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 KDM4CQ9H3R0 1056 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 PIDD1Q9HB75 910 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 MRM3Q9HC36 420 aaKnown RBP17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 TXNDC16Q9P2K2 825 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 CHKBQ9Y259 395 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 KCTD3Q9Y597 815 aa17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 PRRC2BQ5JSZ5 2229 aaKnown RBP17.73■□□□□ 0.43
LRPPRC-203ENST00000409946 RFXAPO00287 272 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 CCL22O00626 93 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 TOP3BO95985 862 aaKnown RBP17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 ITGA2BP08514 1039 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 FOXN2P32314 431 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 GMPRP36959 345 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 CCNFP41002 786 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 ACTN3Q08043 901 aaPredicted RBP17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 SF3A3Q12874 501 aaKnown RBP eCLIP17.72■□□□□ 0.433e-7■■■□□ 15.4
LRPPRC-203ENST00000409946 ZNF77Q15935 545 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 LACTB2Q53H82 288 aaPredicted RBP17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 ATXN7L2Q5T6C5 722 aaPredicted RBP17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 PDPK2PQ6A1A2 396 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 LEMD2Q8NC56 503 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 PTCD2Q8WV60 388 aaKnown RBP17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 ALKBH8Q96BT7 664 aaKnown RBP17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 SMIM14Q96QK8 99 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 TRIB3Q96RU7 358 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 RBBP8Q99708 897 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 LINC00597Q9H2U6 94 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 GGT7Q9UJ14 662 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 INTS6Q9UL03 887 aaKnown RBP17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 MRPS23Q9Y3D9 190 aaKnown RBP17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 BPTFQ12830 3046 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 TRANK1O15050 2925 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 HEATR9A2RTY3 570 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 CCDC85CA6NKD9 419 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 TCP11X1B4DZS4 312 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 TPP1O14773 563 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 ZWINTO95229 277 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 ALDOAP04075 364 aaKnown RBP17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 CYBBP04839 570 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 VIMP08670 466 aaKnown RBP17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 CNTFP26441 200 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 ARCN1P48444 511 aaKnown RBP17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 SLC18A1P54219 525 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 DUSP6Q16828 381 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 MPP7Q5T2T1 576 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 TSTD2Q5T7W7 516 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 ARID3BQ8IVW6 561 aaPredicted RBP17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 BLOC1S5Q8TDH9 187 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 NUDCD1Q96RS6 583 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 SLC13A1Q9BZW2 595 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 HAUS2Q9NVX0 235 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 CDH22Q9UJ99 828 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 PCDHGC4Q9Y5F7 938 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 WNT6Q9Y6F9 365 aa17.72■□□□□ 0.43
LRPPRC-203ENST00000409946 NEDD8-MDP1E9PL57 170 aa17.71■□□□□ 0.43
LRPPRC-203ENST00000409946 COPEO14579 308 aa17.71■□□□□ 0.43
LRPPRC-203ENST00000409946 SMAD6O43541 496 aaKnown RBP17.71■□□□□ 0.43
LRPPRC-203ENST00000409946 BUD23O43709 281 aaKnown RBP17.71■□□□□ 0.43
LRPPRC-203ENST00000409946 RHOAP61586 193 aa17.71■□□□□ 0.43
LRPPRC-203ENST00000409946 IL9RQ01113 521 aa17.71■□□□□ 0.43
LRPPRC-203ENST00000409946 USP4Q13107 963 aa17.71■□□□□ 0.43
LRPPRC-203ENST00000409946 PTPRCAPQ14761 206 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms