RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 MBTD1Q05BQ5 628 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ZNF155Q12901 538 aaPredicted RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 MAP2K5Q13163 448 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 KIAA0408Q6ZU52 694 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 DNAJB14Q8TBM8 379 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 MAGEE2Q8TD90 523 aaPredicted RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 DPYSL5Q9BPU6 564 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 GPC6Q9Y625 555 aaPredicted RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ZMPSTE24O75844 475 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 GYPCP04921 128 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 FDPSP14324 419 aaKnown RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 TRIM16LQ309B1 348 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 XRRA1Q6P2D8 792 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 FAM183BPQ6ZVS7 135 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 KRT73Q86Y46 540 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 CASKIN2Q8WXE0 1202 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 NMD3Q96D46 503 aaKnown RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 CYP2S1Q96SQ9 504 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ACP6Q9NPH0 428 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 RFX7Q2KHR2 1363 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ANO9A1A5B4 782 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 SAP18O00422 153 aaKnown RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 SGTAO43765 313 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 PDE5AO76074 875 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 VIL1P09327 827 aaKnown RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 CXCR3P49682 368 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 DSG1Q02413 1049 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 SLC13A2Q13183 592 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 WDR93Q6P2C0 686 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 UBR7Q8N806 425 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 TRPV3Q8NET8 790 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 EPS8L2Q9H6S3 715 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 C17orf75Q9HAS0 396 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 NMUR1Q9HB89 426 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ABCA8O94911 1581 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 OR2AG2A6NM03 316 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 DGKAP23743 735 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 S100GP29377 79 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 PKNOX1P55347 436 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 CYP4F8P98187 520 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 SPIBQ01892 262 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 SLC22A8Q8TCC7 542 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 SEMA3CQ99985 751 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 PDCD2LQ9BRP1 358 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 NXF3Q9H4D5 531 aaKnown RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ZNF214Q9UL59 606 aaPredicted RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 NAALADL1Q9UQQ1 740 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 MPOP05164 745 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ALPPL2P10696 532 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 THRAP10827 490 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 SLC26A2P50443 739 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ATXN1P54253 815 aaKnown RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ATP1A4Q13733 1029 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 C9orf64Q5T6V5 341 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ZNF606Q8WXB4 792 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 KLHL5Q96PQ7 755 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ADAM7Q9H2U9 754 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ARMCX1Q9P291 453 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 BANF1O75531 89 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 IL33O95760 270 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 PPP2R2BQ00005 443 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 EIF3MQ7L2H7 374 aaKnown RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ZNF720Q7Z2F6 126 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 CYB5D2Q8WUJ1 264 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 UBE2Q2Q8WVN8 375 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 C19orf60Q96EN9 201 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 C1orf50Q9BV19 199 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ATAD3AQ9NVI7 634 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 HCN3Q9P1Z3 774 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 CENPXA8MT69 81 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 GJA1P17302 382 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 RBL1P28749 1068 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 CHKAP35790 457 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 DLG4P78352 724 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 SP140Q13342 867 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 OASLQ15646 514 aaKnown RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 ZBTB46Q86UZ6 589 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 C7orf57Q8NEG2 295 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 DDX4Q9NQI0 724 aaKnown RBP8.47□□□□□ -1.05
SCN9A-203ENST00000409672 VAV3Q9UKW4 847 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 CDH7Q9ULB5 785 aa8.47□□□□□ -1.05
SCN9A-203ENST00000409672 FCHO1O14526 889 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 TPP1O14773 563 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 KHNYNO15037 678 aaKnown RBP8.46□□□□□ -1.05
SCN9A-203ENST00000409672 TMEM253P0C7T8 217 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 ARL3P36405 182 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 SEPHS1P49903 392 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 NRG3P56975 720 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 RDH11Q8TC12 318 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 CAPSLQ8WWF8 208 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 MIEF2Q96C03 454 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 BPIFA3Q9BQP9 254 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 PLA2R1Q13018 1463 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 FUT4P22083 530 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 CORO1AP31146 461 aaKnown RBP8.46□□□□□ -1.05
SCN9A-203ENST00000409672 RYKP34925 604 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 ELK3P41970 407 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 MTA1Q13330 715 aa8.46□□□□□ -1.05
SCN9A-203ENST00000409672 TOP3AQ13472 1001 aaPredicted RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms