RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 ERCC2P18074 760 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 TPM4P67936 248 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 CAMK2BQ13554 666 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 TDRD12Q587J7 1177 aaKnown RBP19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 TPRG1LQ5T0D9 272 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 ARHGAP12Q8IWW6 846 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 NPWQ8N729 165 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 LENG8Q96PV6 779 aaPredicted RBP19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 EIF3CQ99613 913 aaKnown RBP19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 CCDC86Q9H6F5 360 aaKnown RBP19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 DNAJC28Q9NX36 388 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 FFAR2O15552 330 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 MMP20O60882 483 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 MYBL1P10243 752 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 CKMT2P17540 419 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 IL1R2P27930 398 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 FZD2Q14332 565 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 PROX2Q3B8N5 592 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 AFMIDQ63HM1 303 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 ARHGAP36Q6ZRI8 547 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 FAM174AQ8TBP5 190 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 ARHGEF26Q96DR7 871 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 TRIM11Q96F44 468 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 CPEB1Q9BZB8 566 aaKnown RBP19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 MRPL47Q9HD33 250 aaKnown RBP19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 DONSONQ9NYP3 566 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 CWC15Q9P013 229 aaKnown RBP19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 DKK3Q9UBP4 350 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 SPTY2D1-AS1A0A0U1RR47 76 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 TRABD2BA6NFA1 517 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 ARHGAP42A6NI28 874 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 FPGTO14772 594 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 BUB1BO60566 1050 aaPredicted RBP19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 C1SP09871 688 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 GIMD1P0DJR0 217 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 RGRP47804 291 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 ZNF211Q13398 564 aaPredicted RBP19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 ZSCAN30Q86W11 494 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 TMPRSS12Q86WS5 348 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 DCP2Q8IU60 420 aaKnown RBP19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 TP53INP2Q8IXH6 220 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 ASB12Q8WXK4 309 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 SYN2Q92777 582 aaPredicted RBP19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 CENPTQ96BT3 561 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 NCAPGQ9BPX3 1015 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 WRAP53Q9BUR4 548 aaKnown RBP19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 KLF15Q9UIH9 416 aa19.51■□□□□ 0.71
SMARCB1-204ENST00000407422 GOLGA6L19H0YKK7 550 aa19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 DFFAO00273 331 aa19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 RABIFP47224 123 aa19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 DPYSQ14117 519 aa19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 PDE1CQ14123 709 aaPredicted RBP19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 SMTNL2Q2TAL5 461 aa19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 VPS36Q86VN1 386 aa19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 PSTKQ8IV42 348 aaKnown RBP19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 TSEN2Q8NCE0 465 aaKnown RBP19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 OR4C6Q8NH72 309 aa19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 IFT43Q96FT9 208 aa19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 THAP2Q9H0W7 228 aa19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 IFNKQ9P0W0 207 aa19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 CAPN11Q9UMQ6 739 aa19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 BZW2Q9Y6E2 419 aaKnown RBP19.5■□□□□ 0.71
SMARCB1-204ENST00000407422 PALMO75781 387 aa19.49■□□□□ 0.71
SMARCB1-204ENST00000407422 PCK1P35558 622 aa19.49■□□□□ 0.71
SMARCB1-204ENST00000407422 PFN3P60673 137 aa19.49■□□□□ 0.71
SMARCB1-204ENST00000407422 ZBED6P86452 979 aa19.49■□□□□ 0.71
SMARCB1-204ENST00000407422 ZSCAN23Q3MJ62 389 aa19.49■□□□□ 0.71
SMARCB1-204ENST00000407422 CAMK1DQ8IU85 385 aa19.49■□□□□ 0.71
SMARCB1-204ENST00000407422 DENND6BQ8NEG7 585 aa19.49■□□□□ 0.71
SMARCB1-204ENST00000407422 BTBD6Q96KE9 485 aa19.49■□□□□ 0.71
SMARCB1-204ENST00000407422 SUV39H2Q9H5I1 410 aa19.49■□□□□ 0.71
SMARCB1-204ENST00000407422 URB1O60287 2271 aaKnown RBP19.49■□□□□ 0.71
SMARCB1-204ENST00000407422 LOC400499M0QZD8 3231 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 A0A087X0T9 212 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 NEBLO76041 1014 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 CSF2P04141 144 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 GYPCP04921 128 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 SERPING1P05155 500 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 FAM228BP0C875 321 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 MYF5P13349 255 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 JUPP14923 745 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 ACP1P24666 158 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 IGFALSP35858 605 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 HCAR3P49019 387 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 CYP4F3Q08477 520 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 HES3Q5TGS1 186 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 TXNRD3NBQ6F5E7 133 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 PARGQ86W56 976 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 ZSWIM9Q86XI8 627 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 CXorf40AQ8TE69 158 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 ZWILCHQ9H900 591 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 MBNL1Q9NR56 388 aaKnown RBP19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 IPO11Q9UI26 975 aaKnown RBP19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 SHROOM3Q8TF72 1996 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 ASXL3Q9C0F0 2248 aa19.48■□□□□ 0.71
SMARCB1-204ENST00000407422 TM7SF2O76062 418 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 CDK4P11802 303 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 NME1P15531 152 aaKnown RBP19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 XPAP23025 273 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms