RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 MCM3P25205 808 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 KLRC2P26717 231 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 GCH1P30793 250 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 RUNX2Q13950 521 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 NTRK2Q16620 822 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 ME3Q16798 604 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 FBXO43Q4G163 708 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 AWAT1Q58HT5 328 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 RAB41Q5JT25 222 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 KIAA1755Q5JYT7 1200 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 ISM2Q6H9L7 571 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 AAGABQ6PD74 315 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 TSSK4Q6SA08 328 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 ZNF813Q6ZN06 617 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 MOB3CQ70IA8 216 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 SPRED1Q7Z699 444 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 TBC1D26Q86UD7 250 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 CCDC25Q86WR0 208 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 DPP10Q8N608 796 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 TMEM217Q8N7C4 229 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 PNLDC1Q8NA58 520 aaKnown RBP4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 CCDC191Q8NCU4 936 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 ZNF398Q8TD17 642 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 NEU4Q8WWR8 484 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 PSPC1Q8WXF1 523 aaKnown RBP4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 IP6K1Q92551 441 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 C1orf74Q96LT6 269 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 HEMGNQ9BXL5 484 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 SCPEP1Q9HB40 452 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 SLC35C2Q9NQQ7 365 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 RNF146Q9NTX7 359 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 MRPL15Q9P015 296 aaKnown RBP4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 NLKQ9UBE8 527 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 FAM96BQ9Y3D0 163 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 ADAM18Q9Y3Q7 739 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 EIF4G3O43432 1585 aaKnown RBP4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 ZNF644Q9H582 1327 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 AKNAQ7Z591 1439 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 CDK13Q14004 1512 aaKnown RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 KIAA0556O60303 1618 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 SUPT6HQ7KZ85 1726 aaKnown RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 ROCK1Q13464 1354 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 C17orf102A2RUQ5 167 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 FAM157AC9JC47 383 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 CCER2I3L3R5 266 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 LIASO43766 372 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 SLC25A12O75746 678 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 MT-CYBP00156 380 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 TUBB4AP04350 444 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 RB1P06400 928 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 CLTBP09497 229 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 HOXA7P31268 230 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 ACSL1P33121 698 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 GARSP41250 739 aaKnown RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 CENPAP49450 140 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 MRPL12P52815 198 aaKnown RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 TFAP4Q01664 338 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 LRMPQ12912 555 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 PRPF4BQ13523 1007 aaKnown RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 RASA2Q15283 850 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 SHBQ15464 509 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 SPECC1Q5M775 1068 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 TTC39AQ5SRH9 613 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 AMIGO2Q86SJ2 522 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 ZDHHC23Q8IYP9 409 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 OSR1Q8TAX0 266 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 MOAP1Q96BY2 351 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 BBS4Q96RK4 519 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 TM2D2Q9BX73 214 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 FRMD8Q9BZ67 464 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 CXorf56Q9H5V9 222 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 SUCLA2Q9P2R7 463 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 NOL7Q9UMY1 257 aaKnown RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 PTPN23Q9H3S7 1636 aa4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 TROQ12816 1431 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P18-201ENST00000406327 PLB1Q6P1J6 1458 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 TONSLQ96HA7 1378 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 CYP2D7A0A087X1C5 515 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 A0A1W2PQ09 198 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 TYW5A2RUC4 315 aaKnown RBP4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 CBY3A6NI87 242 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 NPIPB8E9PQR5 432 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 SEC31AO94979 1220 aaKnown RBP4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 GCP02774 474 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 APOA4P06727 396 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 MMP3P08254 477 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 PRR35P0CG20 571 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 CYP2A6P11509 494 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 BMP5P22003 454 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 EPHB2P29323 1055 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 HOXA13P31271 388 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 UBA7P41226 1012 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 DPP6P42658 865 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 PIP4K2AP48426 406 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 HDAC4P56524 1084 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 TUBA4AP68366 448 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 IFI35P80217 286 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 PMPCAQ10713 525 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 TMEM266Q2M3C6 531 aa4.96□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZSCAN23Q3MJ62 389 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms