RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 PHF2O75151 1096 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 PIGNO95427 931 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 CD68P34810 354 aaPredicted RBP16.59■□□□□ 0.25
AP1S3-202ENST00000396653 PAFAH1B1P43034 410 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 SUOXP51687 545 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 NEK3P51956 506 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 NIPAL4Q0D2K0 466 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 TCF15Q12870 199 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 ANKRD20A2Q5SQ80 823 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 ANKRD20A1Q5TYW2 823 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 ANKRD20A3Q5VUR7 823 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 ZC3H14Q6PJT7 736 aaKnown RBP16.59■□□□□ 0.25
AP1S3-202ENST00000396653 SLC36A4Q6YBV0 504 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 ERN2Q76MJ5 926 aaKnown RBP16.59■□□□□ 0.25
AP1S3-202ENST00000396653 PARS2Q7L3T8 475 aaKnown RBP16.59■□□□□ 0.25
AP1S3-202ENST00000396653 PID1Q7Z2X4 250 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 HDDC3Q8N4P3 179 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 GAB3Q8WWW8 586 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 RAB7BQ96AH8 199 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 TADA1Q96BN2 335 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 NSMCE3Q96MG7 304 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 KLHL32Q96NJ5 620 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 SGK2Q9HBY8 427 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 VPS45Q9NRW7 570 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 SMARCAL1Q9NZC9 954 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 CYP8B1Q9UNU6 501 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 ZNF148Q9UQR1 794 aa16.59■□□□□ 0.25
AP1S3-202ENST00000396653 C16orf96A6NNT2 1141 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 GCATO75600 419 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 GJB3O75712 270 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 RNASEH2AO75792 299 aaKnown RBP16.58■□□□□ 0.24
AP1S3-202ENST00000396653 MMP2P08253 660 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 NFKB1P19838 968 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 CD6P30203 668 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 FNTAP49354 379 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 METAP1P53582 386 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 PTPN5P54829 565 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 GDF10P55107 478 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 SKOR1P84550 965 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 LMNB2Q03252 620 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 CNTN1Q12860 1018 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 TRAF2Q12933 501 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 SNX1Q13596 522 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 CFAP58Q5T655 872 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 PIP5KL1Q5T9C9 394 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 AGBL4Q5VU57 503 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 CAMK1DQ8IU85 385 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 FAM71DQ8N9W8 422 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 CAPZA3Q96KX2 299 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 AP1M1Q9BXS5 423 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 TDRD1Q9BXT4 1180 aaKnown RBP16.58■□□□□ 0.24
AP1S3-202ENST00000396653 BTBD1Q9H0C5 482 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 PCED1AQ9H1Q7 454 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 KDM4CQ9H3R0 1056 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 CD93Q9NPY3 652 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 WSB2Q9NYS7 404 aaPredicted RBP16.58■□□□□ 0.24
AP1S3-202ENST00000396653 SERGEFQ9UGK8 458 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 RSPH14Q9UHP6 348 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 NUMA1Q14980 2115 aa16.58■□□□□ 0.24
AP1S3-202ENST00000396653 THADAQ6YHU6 1953 aa16.57■□□□□ 0.24
AP1S3-202ENST00000396653 TNRC6BQ9UPQ9 1833 aaKnown RBP16.57■□□□□ 0.24
AP1S3-202ENST00000396653 CCDC188H7C350 402 aa16.57■□□□□ 0.24
AP1S3-202ENST00000396653 PLRG1O43660 514 aaKnown RBP16.57■□□□□ 0.24
AP1S3-202ENST00000396653 AP1G1O43747 822 aa16.57■□□□□ 0.24
AP1S3-202ENST00000396653 FZD6O60353 706 aa16.57■□□□□ 0.24
AP1S3-202ENST00000396653 RPP40O75818 363 aaKnown RBP16.57■□□□□ 0.24
AP1S3-202ENST00000396653 ADRB3P13945 408 aa16.57■□□□□ 0.24
AP1S3-202ENST00000396653 CD86P42081 329 aa16.57■□□□□ 0.24
AP1S3-202ENST00000396653 POM121L1PQ3SYA9 428 aa16.57■□□□□ 0.24
AP1S3-202ENST00000396653 PRPF39Q86UA1 669 aaKnown RBP16.57■□□□□ 0.24
AP1S3-202ENST00000396653 KLHDC8BQ8IXV7 354 aa16.57■□□□□ 0.24
AP1S3-202ENST00000396653 CCDC110Q8TBZ0 833 aa16.57■□□□□ 0.24
AP1S3-202ENST00000396653 GANCQ8TET4 914 aa16.57■□□□□ 0.24
AP1S3-202ENST00000396653 MAGOHBQ96A72 148 aaKnown RBP16.57■□□□□ 0.24
AP1S3-202ENST00000396653 NEUROG2Q9H2A3 272 aa16.57■□□□□ 0.24
AP1S3-202ENST00000396653 RAI2Q9Y5P3 530 aa16.57■□□□□ 0.24
AP1S3-202ENST00000396653 TTC24A2A3L6 582 aaPredicted RBP16.56■□□□□ 0.24
AP1S3-202ENST00000396653 UPK3BL1B0FP48 263 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 UPK3BL2E5RIL1 263 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 ANXA9O76027 345 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 PGLSO95336 258 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 CPP00450 1065 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 NFKBIAP25963 317 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 ACTN2P35609 894 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 COILP38432 576 aaPredicted RBP16.56■□□□□ 0.24
AP1S3-202ENST00000396653 ADPRHP54922 357 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 RPL26P61254 145 aaKnown RBP16.56■□□□□ 0.24
AP1S3-202ENST00000396653 POLR2LP62875 67 aaKnown RBP16.56■□□□□ 0.24
AP1S3-202ENST00000396653 MPP3Q13368 585 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 TUBB2AQ13885 445 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 IHHQ14623 411 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 ARMC12Q5T9G4 340 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 FBXL19Q6PCT2 694 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 C4orf22Q6V702 233 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.56■□□□□ 0.24
AP1S3-202ENST00000396653 ARHGEF18Q6ZSZ5 1173 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 CCDC89Q8N998 374 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 ATL2Q8NHH9 583 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 KIF18AQ8NI77 898 aa16.56■□□□□ 0.24
AP1S3-202ENST00000396653 GRK7Q8WTQ7 553 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms