RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 YBEYP58557 167 aaPredicted RBP15.2■□□□□ 0.02
GPC3-202ENST00000394299 TWF1Q12792 350 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 ZNF235Q14590 738 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 KIAA0930Q6ICG6 404 aaPredicted RBP15.2■□□□□ 0.02
GPC3-202ENST00000394299 CNKSR3Q6P9H4 555 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 FSTL5Q8N475 847 aaPredicted RBP15.2■□□□□ 0.02
GPC3-202ENST00000394299 ZNF781Q8N8C0 355 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 ZNF784Q8NCA9 323 aaPredicted RBP15.2■□□□□ 0.02
GPC3-202ENST00000394299 BLOC1S5Q8TDH9 187 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 TADA1Q96BN2 335 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 OLFM1Q99784 485 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 GATA5Q9BWX5 397 aaPredicted RBP15.2■□□□□ 0.02
GPC3-202ENST00000394299 ACE2Q9BYF1 805 aaPredicted RBP15.2■□□□□ 0.02
GPC3-202ENST00000394299 SAR1AQ9NR31 198 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 VPS45Q9NRW7 570 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 TRPM5Q9NZQ8 1165 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 AGO1Q9UL18 857 aaKnown RBP15.2■□□□□ 0.02
GPC3-202ENST00000394299 LOC285095A0A1B0GVY8 99 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 ENO1P06733 434 aaKnown RBP15.2■□□□□ 0.02
GPC3-202ENST00000394299 CHRNGP07510 517 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 PTPN4P29074 926 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 ALDH1A3P47895 512 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 SLC11A2P49281 568 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 ZXDBP98169 803 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 PTPRRQ15256 657 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 E2F5Q15329 346 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 TMCO4Q5TGY1 634 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 CCDC117Q8IWD4 279 aaPredicted RBP15.2■□□□□ 0.02
GPC3-202ENST00000394299 TMEM169Q96HH4 297 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 TBATAQ96M53 351 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 POLR1EQ9GZS1 481 aaKnown RBP15.2■□□□□ 0.02
GPC3-202ENST00000394299 MRM3Q9HC36 420 aaKnown RBP15.2■□□□□ 0.02
GPC3-202ENST00000394299 SAGE1Q9NXZ1 904 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 DONSONQ9NYP3 566 aa15.2■□□□□ 0.02
GPC3-202ENST00000394299 COL4A6Q14031 1691 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 A0A0U1RQS6 177 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 LDB2O43679 373 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 PRSS56P0CW18 603 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 CD151P48509 253 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 KPNA1P52294 538 aaPredicted RBP15.19■□□□□ 0.02
GPC3-202ENST00000394299 RAB10P61026 200 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 TUBB3Q13509 450 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 RCN2Q14257 317 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 LINGO4Q6UY18 593 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 DNAJB7Q7Z6W7 309 aaPredicted RBP15.19■□□□□ 0.02
GPC3-202ENST00000394299 TMEM150AQ86TG1 271 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 SLC39A11Q8N1S5 342 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 AGAP11Q8TF27 550 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 PTCD2Q8WV60 388 aaKnown RBP15.19■□□□□ 0.02
GPC3-202ENST00000394299 FATE1Q969F0 183 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 PPP1R36Q96LQ0 422 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 GPR78Q96P69 363 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 CADM1Q9BY67 442 aaKnown RBP15.19■□□□□ 0.02
GPC3-202ENST00000394299 WWP1Q9H0M0 922 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 TRPC7Q9HCX4 862 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 MAN1C1Q9NR34 630 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 NSMCE4AQ9NXX6 385 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 ACOT9Q9Y305 439 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 PRR5-ARHGAP8B1AHC4 643 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 ZNF195O14628 629 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 PRRG1O14668 218 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 STMN1P16949 149 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 PAMP19021 973 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 SCNN1BP51168 640 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 ARHGAP8P85298 464 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 DSG1Q02413 1049 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 CDK18Q07002 472 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 SLC12A1Q13621 1099 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 BTG3Q14201 252 aaPredicted RBP15.19■□□□□ 0.02
GPC3-202ENST00000394299 C5orf22Q49AR2 442 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 FSCBQ5H9T9 825 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 FAM219BQ5XKK7 198 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 WDR75Q8IWA0 830 aaKnown RBP15.19■□□□□ 0.02
GPC3-202ENST00000394299 FAM13CQ8NE31 585 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 OR13C4Q8NGS5 318 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 INPP5DQ92835 1189 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 ZNF689Q96CS4 500 aaPredicted RBP15.19■□□□□ 0.02
GPC3-202ENST00000394299 IFT43Q96FT9 208 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 ZNF558Q96NG5 402 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 TOX2Q96NM4 488 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 PPP1R2P1Q96PQ5 205 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 ZNF334Q9HCZ1 680 aaPredicted RBP15.19■□□□□ 0.02
GPC3-202ENST00000394299 TAS2R1Q9NYW7 299 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 CDH23Q9H251 3354 aa15.19■□□□□ 0.02
GPC3-202ENST00000394299 MIA3Q5JRA6 1907 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 MROH6A6NGR9 719 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 CAPN14A8MX76 684 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 CBX4O00257 560 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 TRIM13O60858 407 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 SIN3BO75182 1162 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 ESRRAP11474 423 aaPredicted RBP15.18■□□□□ 0.02
GPC3-202ENST00000394299 GRK2P25098 689 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 CA8P35219 290 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 IDH3AP50213 366 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 KDSRQ06136 332 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 TXNDC8Q6A555 127 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 DNAJC1Q96KC8 554 aaKnown RBP15.18■□□□□ 0.02
GPC3-202ENST00000394299 PRKD2Q9BZL6 878 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 OXSMQ9NWU1 459 aa15.18■□□□□ 0.02
GPC3-202ENST00000394299 XPR1Q9UBH6 696 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms