RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 LAMB3Q13751 1172 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 TEAD2Q15562 447 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 CNGA3Q16281 694 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 TSTD2Q5T7W7 516 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 FYB2Q5VWT5 728 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 FAM109BQ6ICB4 259 aaPredicted RBP11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 WFDC5Q8TCV5 224 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 SH3RF2Q8TEC5 729 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 FAM111AQ96PZ2 611 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 NUDCD1Q96RS6 583 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 PLCD4Q9BRC7 762 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 FGFR1OP2Q9NVK5 253 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 ZDHHC7Q9NXF8 308 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 SLC2A6Q9UGQ3 507 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 ARIH1Q9Y4X5 557 aaPredicted RBP11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 SNAP91O60641 907 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 TMCC1O94876 653 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 VAPBO95292 243 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 NDST3O95803 873 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 HADHAP40939 763 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 ERVK-21P61565 698 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 NSUN2Q08J23 767 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 UGP2Q16851 508 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 PRSS36Q5K4E3 855 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 FSTL4Q6MZW2 842 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 CACNA2D3Q8IZS8 1091 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 TTC16Q8NEE8 873 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 LRRC8CQ8TDW0 803 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 PEX13Q92968 403 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 FAM167BQ9BTA0 163 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 SLC13A1Q9BZW2 595 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 SMG9Q9H0W8 520 aaKnown RBP11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 C12orf65Q9H3J6 166 aaKnown RBP11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 SCUBE2Q9NQ36 999 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 VPS51Q9UID3 782 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 ZMYM5Q9UJ78 669 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 SERPINB8P50452 374 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 SCNN1BP51168 640 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 GPM6BQ13491 265 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 PDE1CQ14123 709 aaPredicted RBP11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 SLC5A9Q2M3M2 681 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 DCLK2Q8N568 766 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 FIBINQ8TAL6 211 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 ATP2A3Q93084 1043 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 C2orf49Q9BVC5 232 aaPredicted RBP11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 RHOJQ9H4E5 214 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 CCL26Q9Y258 94 aa11.55□□□□□ -0.56
SMARCAL1-203ENST00000392128 GOLGA8TH3BQL2 631 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 LDB2O43679 373 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 SNX3O60493 162 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 GLRA3O75311 464 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 CYBBP04839 570 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 TYK2P29597 1187 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 THOC5Q13769 683 aaKnown RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 INSCQ1MX18 579 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 RALGPS1Q5JS13 557 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 ELMSAN1Q6PJG2 1045 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 LINGO4Q6UY18 593 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 KYAT3Q6YP21 454 aaKnown RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 MICALCLQ6ZW33 695 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 ZC3HC1Q86WB0 502 aaKnown RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 OR13J1Q8NGT2 312 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 GABPB2Q8TAK5 448 aaPredicted RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 SPOCK2Q92563 424 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 ZNF75CPQ92670 426 aaPredicted RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 USP13Q92995 863 aaPredicted RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 ACDQ96AP0 544 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 GRAMD1AQ96CP6 724 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 VPS39Q96JC1 886 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 CABS1Q96KC9 395 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 EXOC2Q96KP1 924 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 NSMCE3Q96MG7 304 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 GPR22Q99680 433 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 TDRD1Q9BXT4 1180 aaKnown RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 SNX15Q9NRS6 342 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 TDP1Q9NUW8 608 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 KIAA1522Q9P206 1035 aaPredicted RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 LHX3Q9UBR4 397 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 DCDC2Q9UHG0 476 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 RIMKLBQ9ULI2 386 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 MYO7AQ13402 2215 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 CXorf51AA0A1B0GTR3 108 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 TCF3P15923 654 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 SERPINB4P48594 390 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 ACVR1Q04771 509 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 GALNT3Q14435 633 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 ITIH4Q14624 930 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 SHHQ15465 462 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 ZKSCAN8Q15776 578 aaPredicted RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 RETSATQ6NUM9 610 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 TPGS1Q6ZTW0 290 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 KIAA0408Q6ZU52 694 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 CCDC197Q8NCU1 140 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 C2CD4AQ8NCU7 369 aaPredicted RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 CALML6Q8TD86 181 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 BRSK1Q8TDC3 778 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 PTPRN2Q92932 1015 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 BHMTQ93088 406 aa11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 ELAC2Q9BQ52 826 aaKnown RBP11.54□□□□□ -0.56
SMARCAL1-203ENST00000392128 PITPNM3Q9BZ71 974 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms