RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 KBTBD8Q8NFY9 601 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 AKAP1Q92667 903 aaKnown RBP eCLIP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 ZSCAN5CA6NGD5 496 aaPredicted RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 CDH8P55286 799 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 RASGRP2Q7LDG7 609 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 CLIC5Q9NZA1 410 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 GNEQ9Y223 722 aaKnown RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 PREX2Q70Z35 1606 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 ANKRD65E5RJM6 399 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 OR5F1O95221 314 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 VIL1P09327 827 aaKnown RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 HOXB6P17509 224 aaKnown RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 ZNF276Q8N554 614 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 OR4A15Q8NGL6 344 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 ETNPPLQ8TBG4 499 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 SAMD9LQ8IVG5 1584 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 RAP1GAPP47736 663 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 IL18R1Q13478 541 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 PTGFRNQ9P2B2 879 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 MYRFQ9Y2G1 1151 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 PP2D1A8MPX8 630 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 UBXN7O94888 489 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 CEBPGP53567 150 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 TMEM164Q5U3C3 297 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 EPB41L4AQ9HCS5 686 aaPredicted RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 SNAP91O60641 907 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 ULK1O75385 1050 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 TGFB3P10600 412 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 PDHBP11177 359 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 ETS1P14921 441 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 BUD31P41223 144 aaPredicted RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 FAXCQ5TGI0 409 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 NKAPQ8N5F7 415 aaKnown RBP11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 OR2AJ1Q8NGZ0 328 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 TRAPPC9Q96Q05 1148 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 MTRRQ9UBK8 725 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 MLYCDO95822 493 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 GP5P40197 560 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 METTL7BQ6UX53 244 aa11.31□□□□□ -0.6
PTCHD1-201ENST00000379361 SAGP10523 405 aaPredicted RBP11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 CDH13P55290 713 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 BEND5Q7L4P6 421 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 GSDMCQ9BYG8 508 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 ATPIF1Q9UII2 106 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 RGSL1A5PLK6 1076 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 METTL21EPA6NDL7 271 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 CAPN14A8MX76 684 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 ZNF185O15231 689 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 OR10H3O60404 316 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 CABYRO75952 493 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 DNAJC3Q13217 504 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 PCBP1Q15365 356 aaKnown RBP eCLIP11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 SLC39A12Q504Y0 691 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 NUP54Q7Z3B4 507 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 RASAL3Q86YV0 1011 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 CROCCP3Q8IVE0 287 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 LRRC17Q8N6Y2 441 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 ACACAQ13085 2346 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 APODP05090 189 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 SLC6A2P23975 617 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 MTM1Q13496 603 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 DEF8Q6ZN54 512 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TCEAL3Q969E4 200 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TBATAQ96M53 351 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 VAT1Q99536 393 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 DDX43Q9NXZ2 648 aaKnown RBP11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 SSR3Q9UNL2 185 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TBC1D3DA0A087WVF3 549 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TBC1D3IA0A087WXS9 549 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TBC1D3EA0A087X179 549 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TBC1D3KA0A087X1G2 549 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TBC1D3FA6NER0 549 aaPredicted RBP11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TBC1D3LB9A6J9 549 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 RAD51CO43502 376 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TSPAN3O60637 253 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 IL1BP01584 269 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TBC1D3HP0C7X1 549 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 ABATP80404 500 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TBC1D3GQ6DHY5 549 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TBC1D3CQ6IPX1 549 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 NRSN1Q8IZ57 195 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 TBC1D3Q8IZP1 549 aaPredicted RBP11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 C11orf63Q6NUN7 778 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 CRISPLD1Q9H336 500 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 LDAHQ9H6V9 325 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 MOCS1Q9NZB8 636 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 HEBP2Q9Y5Z4 205 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 GAKO14976 1311 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 MCL1Q07820 350 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 HSDL1Q3SXM5 330 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 LLGL2Q6P1M3 1020 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 KCTD8Q6ZWB6 473 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 OFCC1Q8IZS5 231 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 EXD2Q9NVH0 621 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 SLC24A2Q9UI40 661 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 STOML2Q9UJZ1 356 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 NPTX2P47972 431 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 CYB5D1Q6P9G0 228 aa11.3□□□□□ -0.6
PTCHD1-201ENST00000379361 DCAKDQ8WVC6 231 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms