RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 IMPDH2P12268 514 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 CAPGP40121 348 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 OXCT1P55809 520 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 ATP6V0D1P61421 351 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 SPANXN2Q5MJ10 180 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 MBLAC2Q68D91 279 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 EPGNQ6UW88 154 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 C19orf60Q96EN9 201 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 CLPBQ9H078 707 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 MAGEE1Q9HCI5 957 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 CNGB3Q9NQW8 809 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 TMEM161AQ9NX61 479 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 CRNNQ9UBG3 495 aaPredicted RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 DUX4Q9UBX2 424 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 COL1A2P08123 1366 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 CSDE1O75534 798 aaKnown RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 UPP2O95045 317 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 CST3P01034 146 aaPredicted RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 HOXC6P09630 235 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 ICAM3P32942 547 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 HTR7P34969 479 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 ZBED5Q49AG3 693 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 SFT2D3Q587I9 215 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 PPM1JQ5JR12 505 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 C10orf120Q5SQS8 335 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 ARMC4Q5T2S8 1044 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 RNF219Q5W0B1 726 aaPredicted RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 TRIM74Q86UV6 250 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 TRIM73Q86UV7 250 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 TFAP2BQ92481 460 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 RPRD1AQ96P16 312 aaPredicted RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 ULBP1Q9BZM6 244 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 OR12D3Q9UGF7 316 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 CRLS1Q9UJA2 301 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 INVSQ9Y283 1065 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 ARAP2Q8WZ64 1704 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 ZNF487B1APH4 448 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 DYNC1LI2O43237 492 aaPredicted RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 TULP3O75386 442 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 HMBSP08397 361 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 PTPN1P18031 435 aaKnown RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 SLC11A2P49281 568 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 TUBP50607 506 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 PLK1P53350 603 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 MAPK10P53779 464 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 SPATS1Q496A3 300 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 SLC9B1Q4ZJI4 515 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 ARL13AQ5H913 290 aaPredicted RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 ZC3H12BQ5HYM0 836 aaKnown RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 TTC23LQ6PF05 361 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 MARVELD2Q8N4S9 558 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 COQ10BQ9H8M1 238 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 UGT2B11O75310 529 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 SERPINF2P08697 491 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 PABPC4LP0CB38 370 aaKnown RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 CDH5P33151 784 aaPredicted RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 FAM187BQ17R55 369 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 THAP5Q7Z6K1 395 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 STK40Q8N2I9 435 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 MYDGFQ969H8 173 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 PPP3R2Q96LZ3 170 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 SYT11Q9BT88 431 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 GIN1Q9NXP7 522 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 PTBP2Q9UKA9 531 aaKnown RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 CNOT6Q9ULM6 557 aaKnown RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 ITM2AO43736 263 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 PDE9AO76083 593 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 THP07101 528 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 SPIDRQ14159 915 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 MAPK11Q15759 364 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 MSS51Q4VC12 460 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 INO80DQ53TQ3 878 aaPredicted RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 FSTL4Q6MZW2 842 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 GPSM1Q86YR5 675 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 AMER2Q8N7J2 671 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 SLC47A1Q96FL8 570 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 CDK5RAP1Q96SZ6 601 aaKnown RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 OMDQ99983 421 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 GATA5Q9BWX5 397 aaPredicted RBP8.83□□□□□ -1
PCDH9-202ENST00000377865 CXorf21Q9HAI6 301 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 ABCC13Q9NSE7 274 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 OXSMQ9NWU1 459 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 ADPRHL2Q9NX46 363 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 CACNA2D2Q9NY47 1150 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 ZNF112Q9UJU3 913 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 RPS6KA6Q9UK32 745 aa8.83□□□□□ -1
PCDH9-202ENST00000377865 AQP12BA6NM10 295 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 PTGES3LE9PB15 166 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 SLC28A1O00337 649 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 HGFP14210 728 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 ERCC2P18074 760 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 ITGALP20701 1170 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 IVDP26440 423 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 RPS9P46781 194 aaKnown RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 DLG1Q12959 904 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 C1DQ13901 141 aaKnown RBP8.82□□□□□ -1
PCDH9-202ENST00000377865 DPYSL2Q16555 572 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 SPDYE7PQ495Y7 208 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 EGFLAMQ63HQ2 1017 aa8.82□□□□□ -1
PCDH9-202ENST00000377865 RRM2BQ7LG56 351 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms