RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 MRPS6P82932 125 aaKnown RBP13.06□□□□□ -0.32
MSH5-204ENST00000375755 BNIP3Q12983 259 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 KCNA10Q16322 511 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 CA9Q16790 459 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 OLFML1Q6UWY5 402 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 SETD3Q86TU7 594 aaPredicted RBP13.06□□□□□ -0.32
MSH5-204ENST00000375755 HERC6Q8IVU3 1022 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 CHPT1Q8WUD6 406 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 RXFP2Q8WXD0 754 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 KHSRPQ92945 711 aaKnown RBP eCLIP13.06□□□□□ -0.32
MSH5-204ENST00000375755 MTG1Q9BT17 334 aaPredicted RBP13.06□□□□□ -0.32
MSH5-204ENST00000375755 NAA50Q9GZZ1 169 aaKnown RBP13.06□□□□□ -0.32
MSH5-204ENST00000375755 ILKAPQ9H0C8 392 aaPredicted RBP13.06□□□□□ -0.32
MSH5-204ENST00000375755 Q9Y3F1 56 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 FAM32AQ9Y421 112 aaKnown RBP13.06□□□□□ -0.32
MSH5-204ENST00000375755 TMEM114B3SHH9 223 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 HDAC3O15379 428 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 GRID2O43424 1007 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 PRPSAP2O60256 369 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 JUNP05412 331 aaKnown RBP13.05□□□□□ -0.32
MSH5-204ENST00000375755 ERVK-10P10266 1014 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 TKTP29401 623 aaKnown RBP13.05□□□□□ -0.32
MSH5-204ENST00000375755 TMED10P49755 219 aaKnown RBP13.05□□□□□ -0.32
MSH5-204ENST00000375755 IRF9Q00978 393 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 RFTN1Q14699 578 aaPredicted RBP13.05□□□□□ -0.32
MSH5-204ENST00000375755 PKDCCQ504Y2 493 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 GPR107Q5VW38 600 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 NXNQ6DKJ4 435 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 CES3Q6UWW8 571 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 NT5DC4Q86YG4 428 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 DCLK2Q8N568 766 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 PCDH20Q8N6Y1 951 aaKnown RBP13.05□□□□□ -0.32
MSH5-204ENST00000375755 ASB9Q96DX5 294 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 PGLYRP2Q96PD5 576 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 GAD1Q99259 594 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 NPLQ9BXD5 320 aaPredicted RBP13.05□□□□□ -0.32
MSH5-204ENST00000375755 TRMT13Q9NUP7 481 aaKnown RBP13.05□□□□□ -0.32
MSH5-204ENST00000375755 IPO11Q9UI26 975 aaKnown RBP13.05□□□□□ -0.32
MSH5-204ENST00000375755 ITGB1BP2Q9UKP3 347 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 UBQLN1Q9UMX0 589 aaKnown RBP13.05□□□□□ -0.32
MSH5-204ENST00000375755 SOCS2O14508 198 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 MGEA5O60502 916 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 TRIM13O60858 407 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 ADAMTS4O75173 837 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 GCATO75600 419 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 TOMM70O94826 608 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 STAU1O95793 577 aaKnown RBP13.05□□□□□ -0.32
MSH5-204ENST00000375755 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
MSH5-204ENST00000375755 MGAT1P26572 445 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 BMXP51813 675 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 KCNC4Q03721 635 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 PMS2P3Q13401 168 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 HERC3Q15034 1050 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 SEL1L3Q68CR1 1132 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 SCYL2Q6P3W7 929 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 TMEM26Q6ZUK4 368 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 ARNTL2Q8WYA1 636 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 TFAP2CQ92754 450 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 ZBTB26Q9HCK0 441 aa13.05□□□□□ -0.32
MSH5-204ENST00000375755 TUBA8Q9NY65 449 aaPredicted RBP13.05□□□□□ -0.32
MSH5-204ENST00000375755 PAPSS1O43252 624 aaPredicted RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 TADA2AO75478 443 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 GPD1P21695 349 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 GNL1P36915 607 aaPredicted RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 LILRA4P59901 499 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 CDC42EP1Q00587 391 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 RHDQ02161 417 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 GBE1Q04446 702 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 TRIM25Q14258 630 aaKnown RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 DLG2Q15700 870 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 PAN2Q504Q3 1202 aaKnown RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 KIAA0319Q5VV43 1072 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 MFSD14CQ5VZR4 134 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 NIPAL1Q6NVV3 410 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 ZBTB49Q6ZSB9 765 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 CHSY3Q70JA7 882 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 C3orf58Q8NDZ4 430 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 ADAMTS16Q8TE57 1224 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 ITPKCQ96DU7 683 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 SGF29Q96ES7 293 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 CNPY3Q9BT09 278 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 DERAQ9Y315 318 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 CORINQ9Y5Q5 1042 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 E7ENX8 843 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 SULT1C4O75897 302 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 BEST1O76090 585 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 BAIAP3O94812 1187 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 LCP1P13796 627 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 PDGFRAP16234 1089 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 THPOP40225 353 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 ABCG1P45844 678 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 PSME3P61289 254 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 SEMA5AQ13591 1074 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 CCDC14Q49A88 953 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 BSPRYQ5W0U4 402 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 EGFLAMQ63HQ2 1017 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 TTC33Q6PID6 262 aaPredicted RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 CYP2R1Q6VVX0 501 aa13.04□□□□□ -0.32
MSH5-204ENST00000375755 CTU1Q7Z7A3 348 aaKnown RBP13.04□□□□□ -0.32
MSH5-204ENST00000375755 FAM110BQ8TC76 370 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms