RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 CNTN4Q8IWV2 1026 aa21.34■■□□□ 1.01
UPF3A-202ENST00000375299 SGF29Q96ES7 293 aa21.34■■□□□ 1.01
UPF3A-202ENST00000375299 MRPL57Q9BQC6 102 aaKnown RBP21.34■■□□□ 1.01
UPF3A-202ENST00000375299 BRD8Q9H0E9 1235 aa21.34■■□□□ 1.01
UPF3A-202ENST00000375299 UPF3AQ9H1J1 476 aaKnown RBP21.34■■□□□ 1.01
UPF3A-202ENST00000375299 SNX25Q9H3E2 840 aa21.34■■□□□ 1.01
UPF3A-202ENST00000375299 FNDC1Q4ZHG4 1894 aaPredicted RBP21.34■■□□□ 1.01
UPF3A-202ENST00000375299 STAMBPO95630 424 aa21.33■■□□□ 1.01
UPF3A-202ENST00000375299 TXNP10599 105 aaKnown RBP21.33■■□□□ 1.01
UPF3A-202ENST00000375299 ATP5F1P24539 256 aaPredicted RBP21.33■■□□□ 1.01
UPF3A-202ENST00000375299 C16orf72Q14CZ0 275 aa21.33■■□□□ 1.01
UPF3A-202ENST00000375299 PSMD5Q16401 504 aa21.33■■□□□ 1.01
UPF3A-202ENST00000375299 DCAF4L1Q3SXM0 396 aa21.33■■□□□ 1.01
UPF3A-202ENST00000375299 C8orf82Q6P1X6 216 aaPredicted RBP21.33■■□□□ 1.01
UPF3A-202ENST00000375299 ERMP1Q7Z2K6 904 aa21.33■■□□□ 1.01
UPF3A-202ENST00000375299 DHFR2Q86XF0 187 aa21.33■■□□□ 1.01
UPF3A-202ENST00000375299 DENND6AQ8IWF6 608 aa21.33■■□□□ 1.01
UPF3A-202ENST00000375299 AFAP1L2Q8N4X5 818 aa21.33■■□□□ 1.01
UPF3A-202ENST00000375299 C12orf43Q96C57 262 aaKnown RBP21.33■■□□□ 1.01
UPF3A-202ENST00000375299 ANLNQ9NQW6 1124 aa21.33■■□□□ 1.01
UPF3A-202ENST00000375299 ARMC1Q9NVT9 282 aa21.33■■□□□ 1.01
UPF3A-202ENST00000375299 PTBP2Q9UKA9 531 aaKnown RBP21.33■■□□□ 1.01
UPF3A-202ENST00000375299 AKAP10O43572 662 aa21.33■■□□□ 1
UPF3A-202ENST00000375299 DNAJB2P25686 324 aa21.33■■□□□ 1
UPF3A-202ENST00000375299 ADRA1BP35368 520 aa21.33■■□□□ 1
UPF3A-202ENST00000375299 SEMA3BQ13214 749 aa21.33■■□□□ 1
UPF3A-202ENST00000375299 ELMSAN1Q6PJG2 1045 aa21.33■■□□□ 1
UPF3A-202ENST00000375299 HACD2Q6Y1H2 254 aa21.33■■□□□ 1
UPF3A-202ENST00000375299 ADAMTS16Q8TE57 1224 aa21.33■■□□□ 1
UPF3A-202ENST00000375299 VAT1Q99536 393 aa21.33■■□□□ 1
UPF3A-202ENST00000375299 SLC25A23Q9BV35 468 aa21.33■■□□□ 1
UPF3A-202ENST00000375299 TDRKHQ9Y2W6 561 aaKnown RBP21.33■■□□□ 1
UPF3A-202ENST00000375299 SH3GLB1Q9Y371 365 aa21.33■■□□□ 1
UPF3A-202ENST00000375299 CSADQ9Y600 493 aa21.33■■□□□ 1
UPF3A-202ENST00000375299 RPL10P27635 214 aaKnown RBP21.32■■□□□ 1
UPF3A-202ENST00000375299 KPNA2P52292 529 aaKnown RBP21.32■■□□□ 1
UPF3A-202ENST00000375299 C1QTNF8P60827 252 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 CTBSQ01459 385 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 CTBP1Q13363 440 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 PRPSAP1Q14558 356 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 INTS6LQ5JSJ4 861 aaKnown RBP21.32■■□□□ 1
UPF3A-202ENST00000375299 LAYNQ6UX15 382 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 PACRGLQ8N7B6 248 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 MFSD2AQ8NA29 543 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 RNF169Q8NCN4 708 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 OR2T34Q8NGX1 318 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 OR2T3Q8NH03 318 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 TEKT5Q96M29 485 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 SLC2A13Q96QE2 648 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 NEMP2A6NFY4 417 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 NRP2O60462 931 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 HSPA8P11142 646 aaKnown RBP21.32■■□□□ 1
UPF3A-202ENST00000375299 LRPAP1P30533 357 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 GALNT2Q10471 571 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 PPP1R3AQ16821 1122 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 ZNF786Q8N393 782 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 TNIP2Q8NFZ5 429 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 HEXDCQ8WVB3 486 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 CANT1Q8WVQ1 401 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 NTAN1Q96AB6 310 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 SLC9A7Q96T83 725 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 TXNRD2Q9NNW7 524 aa21.32■■□□□ 1
UPF3A-202ENST00000375299 A0A087X1B8 175 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 SLC25A27O95847 323 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 MYF6P23409 242 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 AIF1P55008 147 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 PLOD1Q02809 727 aaPredicted RBP21.31■■□□□ 1
UPF3A-202ENST00000375299 ZNF618Q5T7W0 954 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 PKN3Q6P5Z2 889 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 TTC33Q6PID6 262 aaPredicted RBP21.31■■□□□ 1
UPF3A-202ENST00000375299 LINC00523Q86TU6 105 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 ARHGEF38Q9NXL2 777 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 CDH7Q9ULB5 785 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 DNAJC25-GNG10A0A024R161 153 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 A0A0G2JLL6 359 aaPredicted RBP21.31■■□□□ 1
UPF3A-202ENST00000375299 SAC3D1A6NKF1 404 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 GPC4O75487 556 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 ATP6V1B2P21281 511 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 GRIA3P42263 894 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 NDUFV1P49821 464 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 SLC7A2P52569 658 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 PCID2Q5JVF3 399 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 FBXO47Q5MNV8 452 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 PRRT2Q7Z6L0 340 aaPredicted RBP21.31■■□□□ 1
UPF3A-202ENST00000375299 ELMO2Q96JJ3 720 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 DCUN1D5Q9BTE7 237 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 HIPK3Q9H422 1215 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 EML4Q9HC35 981 aaKnown RBP21.31■■□□□ 1
UPF3A-202ENST00000375299 TNFRSF12AQ9NP84 129 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 SMOXQ9NWM0 555 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 GJD2Q9UKL4 321 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 SH3BP1Q9Y3L3 701 aa21.31■■□□□ 1
UPF3A-202ENST00000375299 LGALS2P05162 132 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 CD97P48960 835 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 HCAR3P49019 387 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 NME5P56597 212 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 TAS2R39P59534 338 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 SCAPQ12770 1279 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 INTS11Q5TA45 600 aaKnown RBP21.3■■□□□ 1
UPF3A-202ENST00000375299 HFE2Q6ZVN8 426 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 521.7 ms