RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 HPS1Q92902 700 aa12.53□□□□□ -0.4
TPR-201ENST00000367478 AP1S3Q96PC3 154 aa12.53□□□□□ -0.4
TPR-201ENST00000367478 RBM4BQ9BQ04 359 aaKnown RBP12.53□□□□□ -0.4
TPR-201ENST00000367478 APOL2Q9BQE5 337 aa12.53□□□□□ -0.4
TPR-201ENST00000367478 RBM4Q9BWF3 364 aaKnown RBP12.53□□□□□ -0.4
TPR-201ENST00000367478 EXD2Q9NVH0 621 aa12.53□□□□□ -0.4
TPR-201ENST00000367478 OR10H1Q9Y4A9 318 aa12.53□□□□□ -0.4
TPR-201ENST00000367478 SUV39H1O43463 412 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 IGFALSP35858 605 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 HLFQ16534 295 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 AMHR2Q16671 573 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 PFKFB4Q16877 469 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 ADGRG2Q8IZP9 1017 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 FSTL5Q8N475 847 aaPredicted RBP12.52□□□□□ -0.4
TPR-201ENST00000367478 ARRDC4Q8NCT1 418 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 CITED4Q96RK1 184 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 RGS10O43665 173 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 OTCP00480 354 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 MMP13P45452 471 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 VPS26BQ4G0F5 336 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 MIIPQ5JXC2 388 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 HOPXQ9BPY8 73 aaPredicted RBP12.52□□□□□ -0.4
TPR-201ENST00000367478 SEMA4AQ9H3S1 761 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 MAGEL2Q9UJ55 1249 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 TRPM1Q7Z4N2 1603 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 NKRFO15226 690 aaKnown RBP eCLIP12.52□□□□□ -0.4
TPR-201ENST00000367478 FTH1P02794 183 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 PAEPP09466 180 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 PITPNAQ00169 270 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 PACS2Q86VP3 889 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 GPER1Q99527 375 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 SENP6Q9GZR1 1112 aaPredicted RBP12.52□□□□□ -0.4
TPR-201ENST00000367478 EXO5Q9H790 373 aa12.52□□□□□ -0.4
TPR-201ENST00000367478 SLC9A3R1O14745 358 aaPredicted RBP12.52□□□□□ -0.41
TPR-201ENST00000367478 CLCN5P51795 746 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 ELF3P78545 371 aaPredicted RBP12.52□□□□□ -0.41
TPR-201ENST00000367478 GCNT7Q6ZNI0 430 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 RBM44Q6ZP01 1051 aaKnown RBP12.52□□□□□ -0.41
TPR-201ENST00000367478 LPCAT1Q8NF37 534 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 PDE2AO00408 941 aaPredicted RBP12.52□□□□□ -0.41
TPR-201ENST00000367478 MGAT1P26572 445 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 THOP1P52888 689 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 PSME3P61289 254 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 INO80EQ8NBZ0 244 aaPredicted RBP12.52□□□□□ -0.41
TPR-201ENST00000367478 SLC4A9Q96Q91 983 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 NOL11Q9H8H0 719 aaKnown RBP12.52□□□□□ -0.41
TPR-201ENST00000367478 SPG21Q9NZD8 308 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 ZDHHC9Q9Y397 364 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 PCDHA11Q9Y5I1 949 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 CNTNAP5Q8WYK1 1306 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 AXIN1O15169 862 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 DCKP27707 260 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 ABRQ12979 859 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 EPC2Q52LR7 807 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 FATE1Q969F0 183 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 PHF12Q96QT6 1004 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 SP140LQ9H930 580 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 HMGXB4Q9UGU5 601 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 ZNF608Q9ULD9 1512 aaPredicted RBP12.52□□□□□ -0.41
TPR-201ENST00000367478 ERVK-7P63135 1459 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 LSM1O15116 133 aaKnown RBP12.52□□□□□ -0.41
TPR-201ENST00000367478 UGT2B17O75795 530 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 CYB5AP00167 134 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 PDHA2P29803 388 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 LCN1P1Q5VSP4 162 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 FAM84BQ96KN1 310 aaPredicted RBP12.52□□□□□ -0.41
TPR-201ENST00000367478 SPACA7Q96KW9 195 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 C2orf49Q9BVC5 232 aaPredicted RBP12.52□□□□□ -0.41
TPR-201ENST00000367478 CDHR5Q9HBB8 845 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 SEMA3GQ9NS98 782 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 A0A0G2JPF8 293 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 HNRNPCL3B7ZW38 293 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 VAPBO95292 243 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 HNRNPCL4P0DMR1 293 aa12.52□□□□□ -0.41
TPR-201ENST00000367478 FDPSP14324 419 aaKnown RBP12.52□□□□□ -0.41
TPR-201ENST00000367478 PTX3P26022 381 aaPredicted RBP12.52□□□□□ -0.41
TPR-201ENST00000367478 ORC5O43913 435 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 PPP2R2BQ00005 443 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 SLC20A2Q08357 652 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 WFS1O76024 890 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 ALDH2P05091 517 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 TUBP50607 506 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 PARP6Q2NL67 630 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 TP53INP1Q96A56 240 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 GMCL1Q96IK5 515 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 CRAMP1Q96RY5 1269 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 RAB21Q9UL25 225 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 OGDHLQ9ULD0 1010 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 SLC12A4Q9UP95 1085 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 CROCCQ5TZA2 2017 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 PIGNO95427 931 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 TGFB3P10600 412 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 ARPC4P59998 168 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 CYP4F2P78329 520 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 CYP4F3Q08477 520 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 PPM1LQ5SGD2 360 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 C15orf40Q8WUR7 153 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 MRPS33Q9Y291 106 aaKnown RBP12.51□□□□□ -0.41
TPR-201ENST00000367478 CAPN6Q9Y6Q1 641 aa12.51□□□□□ -0.41
TPR-201ENST00000367478 SNAP23O00161 211 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms