RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 CLCC1Q96S66 551 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 CHIAQ9BZP6 476 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 CLPBQ9H078 707 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 TRIT1Q9H3H1 467 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 FBXO10Q9UK96 956 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 VPS9D1Q9Y2B5 631 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 PPLO60437 1756 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 C2orf81A6NN90 581 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 ERI2A8K979 691 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 SGPL1O95470 568 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 CASP12Q6UXS9 341 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 SLC22A8Q8TCC7 542 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 USP7Q93009 1102 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 REEP2Q9BRK0 252 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 EXD2Q9NVH0 621 aa11.15□□□□□ -0.62
CDC42BPA-205ENST00000366769 H6PDO95479 791 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 TXNP10599 105 aaKnown RBP11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 SLC18A2Q05940 514 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 MYLK3Q32MK0 819 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 ART4Q93070 314 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 CHCHD6Q9BRQ6 235 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 TP63Q9H3D4 680 aaPredicted RBP11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 MRC2Q9UBG0 1479 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 ASB14A6NK59 587 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 FOXN2P32314 431 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 FSTL1Q12841 308 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 SLC47A1Q96FL8 570 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 TMEM246Q9BRR3 403 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 NEK6Q9HC98 313 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 HPF1Q9NWY4 346 aa11.15□□□□□ -0.63
CDC42BPA-205ENST00000366769 IFNA14P01570 189 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 SMCO1Q147U7 214 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 NR6A1Q15406 480 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 GALNT7Q86SF2 657 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 RBM23Q86U06 439 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 SLC9A6Q92581 669 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 ACOX2Q99424 681 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 OR6C70A6NIJ9 312 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 KIAA0391O15091 583 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 TIMM44O43615 452 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 RPS3P23396 243 aaKnown RBP eCLIP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 SQLEQ14534 574 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 ZBED5Q49AG3 693 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 PLET1Q6UQ28 207 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 CYP2U1Q7Z449 544 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 SPPL2AQ8TCT8 520 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 RTKNQ9BST9 563 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 RHBGQ9H310 441 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 S100A2P29034 98 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 TOB1P50616 345 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 FAM214AQ32MH5 1076 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 IQCKQ8N0W5 287 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 SLC44A5Q8NCS7 719 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 TRPV3Q8NET8 790 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 SH3PXD2BA1X283 911 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 H3BMM5 538 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 KPNA3O00505 521 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 ORC5O43913 435 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 KCNH1O95259 989 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 ST3GAL1Q11201 340 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 TDRD10Q5VZ19 366 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 PPP2R2DQ66LE6 453 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 SLC47A2Q86VL8 602 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 SMG7Q92540 1137 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 PIGKQ92643 395 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 CKAP5Q14008 2032 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 NDUFS2O75306 463 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 PAEPP09466 180 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 RXRBP28702 533 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 SCN1BQ07699 218 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 PIGHQ14442 188 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 SLC5A5Q92911 643 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 SMCO3A2RU48 225 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 CCDC154A6NI56 674 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 C9IYK1 514 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 ATP6V1G2-DDX39BF2Z307 99 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 PGRP06401 933 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 ATP5BP06576 529 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 MBL2P11226 248 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 GJA9P57773 515 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 PABPC1LQ4VXU2 614 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 ST8SIA2Q92186 375 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 PPP1R2P1Q96PQ5 205 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 MAPK1P28482 360 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 CD40LGP29965 261 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 CDK9P50750 372 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 FAM92BQ6ZTR7 304 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 ZDHHC13Q8IUH4 622 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 ARMC8Q8IUR7 673 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 BAP1Q92560 729 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 VPS35Q96QK1 796 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 MTRRQ9UBK8 725 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 SMIM22K7EJ46 135 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 MMP10P09238 476 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 MAGEA12P43365 314 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 PLK1P53350 603 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 STXBP1P61764 594 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 TIMM50Q3ZCQ8 353 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 KLHL28Q9NXS3 571 aa11.14□□□□□ -0.63
CDC42BPA-205ENST00000366769 GRM4Q14833 912 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms