RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 AMHP03971 560 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 IMPDH2P12268 514 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 PSMA4P25789 261 aaKnown RBP12.37□□□□□ -0.43
COL20A1-201ENST00000358894 FMO4P31512 558 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 CYP2C18P33260 490 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 TRPC1P48995 793 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 PGGT1BP53609 377 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 TTC33Q6PID6 262 aaPredicted RBP12.37□□□□□ -0.43
COL20A1-201ENST00000358894 FSTL5Q8N475 847 aaPredicted RBP12.37□□□□□ -0.43
COL20A1-201ENST00000358894 FBXO39Q8N4B4 442 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 BRI3BPQ8WY22 251 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 RRAGCQ9HB90 399 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 SEMA4BQ9NPR2 832 aaPredicted RBP12.37□□□□□ -0.43
COL20A1-201ENST00000358894 IGSF9Q9P2J2 1179 aa12.37□□□□□ -0.43
COL20A1-201ENST00000358894 NEMP2A6NFY4 417 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 LRPAP1P30533 357 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 PSMD5Q16401 504 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 CCL14Q16627 93 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 TBCELQ5QJ74 424 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 POTEHQ6S545 545 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 TMCO5AQ8N6Q1 288 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 PTGR2Q8N8N7 351 aaPredicted RBP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 FAM156AQ8NDB6 213 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 ABHD8Q96I13 439 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 TMEM79Q9BSE2 394 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 TLR8Q9NR97 1041 aaKnown RBP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 FBXW11Q9UKB1 542 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 COL5A3P25940 1745 aaPredicted RBP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 CDK5RAP2Q96SN8 1893 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 SYCE1LA8MT33 242 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 SNAI1O95863 264 aaPredicted RBP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 NELFEP18615 380 aaKnown RBP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 PEX2P28328 305 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 PSME3P61289 254 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 SCIMPQ6UWF3 145 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 GK5Q6ZS86 529 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 ASRGL1Q7L266 308 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 FBXW8Q8N3Y1 598 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 RP9Q8TA86 221 aaKnown RBP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 TEKT5Q96M29 485 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 SEPHS2Q99611 448 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 MIPEPQ99797 713 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 MRPL57Q9BQC6 102 aaKnown RBP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 FAM124BQ9H5Z6 455 aaPredicted RBP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 SYTL2Q9HCH5 934 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 RIC8BQ9NVN3 520 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 PCDHB7Q9Y5E2 793 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 PCDHB12Q9Y5F1 795 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 INPP4BO15327 924 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 BEST1O76090 585 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 CRTAMO95727 393 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 RHOCP08134 193 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 LINGO3P0C6S8 592 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 HSPA1AP0DMV8 641 aaKnown RBP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 HSPA1BP0DMV9 641 aaKnown RBP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 ZNF23P17027 643 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 SLC5A3P53794 718 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 PDK3Q15120 406 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 LSM12Q3MHD2 195 aaKnown RBP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 SLC9B1Q4ZJI4 515 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 FBXO48Q5FWF7 155 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 RBM44Q6ZP01 1051 aaKnown RBP12.36□□□□□ -0.43
COL20A1-201ENST00000358894 ZNF554Q86TJ5 538 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 MOCOSQ96EN8 888 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 ATP13A1Q9HD20 1204 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 PNPLA8Q9NP80 782 aa12.36□□□□□ -0.43
COL20A1-201ENST00000358894 A0A087X1B8 175 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 ARL5CA6NH57 179 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 WARSP23381 471 aaKnown RBP12.35□□□□□ -0.43
COL20A1-201ENST00000358894 RECQLP46063 649 aaPredicted RBP12.35□□□□□ -0.43
COL20A1-201ENST00000358894 GLUD2P49448 558 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 TAS2R39P59534 338 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 SOX4Q06945 474 aaPredicted RBP12.35□□□□□ -0.43
COL20A1-201ENST00000358894 SLC5A9Q2M3M2 681 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 TIGD5Q53EQ6 642 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 ANO7Q6IWH7 933 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 TAPT1Q6NXT6 567 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 B3GNT6Q6ZMB0 384 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 DHFR2Q86XF0 187 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 ATAD1Q8NBU5 361 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 NPLOC4Q8TAT6 608 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 TRPC4APQ8TEL6 797 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 SKA1Q96BD8 255 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 SLC25A23Q9BV35 468 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 THUMPD3Q9BV44 507 aaKnown RBP12.35□□□□□ -0.43
COL20A1-201ENST00000358894 POLR1EQ9GZS1 481 aaKnown RBP12.35□□□□□ -0.43
COL20A1-201ENST00000358894 SCUBE2Q9NQ36 999 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 PPM1HQ9ULR3 514 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 PADI3Q9ULW8 664 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 SCN9AQ15858 1988 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 A0A1W2PQH9 124 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 FAM72CH0Y354 149 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 BTN3A1O00481 513 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 KLF11O14901 512 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 KPNA6O60684 536 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 KATNA1O75449 491 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 FAM58BPP0C7Q3 252 aa12.35□□□□□ -0.43
COL20A1-201ENST00000358894 RPL9P32969 192 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms