RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 COCHO43405 550 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 MYL4P12829 197 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 HLA-DPA1P20036 260 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 CCND1P24385 295 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 KPNA2P52292 529 aaKnown RBP16.84■□□□□ 0.29
SAMM50-201ENST00000350028 SLC12A2P55011 1212 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 IHHQ14623 411 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 SLC14A2Q15849 920 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 TRIM60Q495X7 471 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 RFWD3Q6PCD5 774 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 CFAP52Q8N1V2 620 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 STYXQ8WUJ0 223 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 IFT43Q96FT9 208 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 ELMO2Q96JJ3 720 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 SCYL1Q96KG9 808 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 PNPOQ9NVS9 261 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 APOBEC2Q9Y235 224 aaKnown RBP16.84■□□□□ 0.29
SAMM50-201ENST00000350028 ZFP37Q9Y6Q3 630 aaPredicted RBP16.84■□□□□ 0.29
SAMM50-201ENST00000350028 A8MUI8 341 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 GYG2O15488 501 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 CLDN11O75508 207 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 HSPA4LO95757 839 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 FGF1P05230 155 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 ATXN1LP0C7T5 689 aaKnown RBP16.84■□□□□ 0.29
SAMM50-201ENST00000350028 ALDH1A3P47895 512 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 LEPRP48357 1165 aaKnown RBP16.84■□□□□ 0.29
SAMM50-201ENST00000350028 PPP3CCP48454 512 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 CLCN5P51795 746 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 DSG1Q02413 1049 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 ASPHQ12797 758 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 TUBB3Q13509 450 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 WASHC2DQ5SRD0 308 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 SPOUT1Q5T280 376 aaKnown RBP16.84■□□□□ 0.29
SAMM50-201ENST00000350028 C1orf53Q5VUE5 145 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 ALG1LQ6GMV1 187 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 TMEM151AQ8N4L1 468 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 KCTD4Q8WVF5 259 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 PEX13Q92968 403 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 TRMT2BQ96GJ1 504 aaKnown RBP16.84■□□□□ 0.29
SAMM50-201ENST00000350028 ZNF558Q96NG5 402 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 EBF4Q9BQW3 602 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 HERC2P3Q9BVR0 1158 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 CCDC106Q9BWC9 280 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 GATA5Q9BWX5 397 aaPredicted RBP16.84■□□□□ 0.29
SAMM50-201ENST00000350028 ARMCX1Q9P291 453 aa16.84■□□□□ 0.29
SAMM50-201ENST00000350028 CHD5Q8TDI0 1954 aa16.83■□□□□ 0.29
SAMM50-201ENST00000350028 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.83■□□□□ 0.28
SAMM50-201ENST00000350028 GSC2O15499 205 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 KDELR3O43731 214 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 KLHL2O95198 593 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 HOXD9P28356 352 aaPredicted RBP16.83■□□□□ 0.28
SAMM50-201ENST00000350028 ARRB2P32121 409 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 RFC2P35250 354 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 AVPR1AP37288 418 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 MNX1P50219 401 aaPredicted RBP16.83■□□□□ 0.28
SAMM50-201ENST00000350028 TAS2R39P59534 338 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 TAF12Q16514 161 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 LIPMQ5VYY2 423 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 LRRC8EQ6NSJ5 796 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 ATG14Q6ZNE5 492 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 DENND1CQ8IV53 801 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 MFSD6LQ8IWD5 586 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 CENPLQ8N0S6 344 aaPredicted RBP16.83■□□□□ 0.28
SAMM50-201ENST00000350028 GPATCH11Q8N954 259 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 FAM13CQ8NE31 585 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 OR13J1Q8NGT2 312 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 ARMC5Q96C12 935 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 DDX50Q9BQ39 737 aaKnown RBP16.83■□□□□ 0.28
SAMM50-201ENST00000350028 CADM1Q9BY67 442 aaKnown RBP16.83■□□□□ 0.28
SAMM50-201ENST00000350028 MFSD1Q9H3U5 465 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 CYP4F11Q9HBI6 524 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.83■□□□□ 0.28
SAMM50-201ENST00000350028 CPSF2Q9P2I0 782 aaKnown RBP16.83■□□□□ 0.28
SAMM50-201ENST00000350028 SEPT3Q9UH03 358 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 TAGLN3Q9UI15 199 aa16.83■□□□□ 0.28
SAMM50-201ENST00000350028 ILVBLA1L0T0 632 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 TTC24A2A3L6 582 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-201ENST00000350028 TARM1B6A8C7 271 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 H3BNC9 293 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 ZNF195O14628 629 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 STC2O76061 302 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 SERPINF2P08697 491 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 SBK3P0C264 359 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 IDH3AP50213 366 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 HK2P52789 917 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 ALDH18A1P54886 795 aaKnown RBP16.82■□□□□ 0.28
SAMM50-201ENST00000350028 RFTN1Q14699 578 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-201ENST00000350028 VEPH1Q14D04 833 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 IL31Q6EBC2 164 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 CNSTQ6PJW8 725 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 NAPRTQ6XQN6 538 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 CHST9Q7L1S5 443 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 TREML1Q86YW5 311 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 CEP97Q8IW35 865 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 SLC39A11Q8N1S5 342 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 FSTL5Q8N475 847 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-201ENST00000350028 OR7D4Q8NG98 312 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 TSPAN17Q96FV3 270 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 TMEM169Q96HH4 297 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 GPR78Q96P69 363 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms