RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 IFITM3Q01628 133 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 CLCQ05315 142 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 PIGFQ07326 219 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 IFRD2Q12894 506 aaPredicted RBP15.48■□□□□ 0.07
LMNA-201ENST00000347559 CAPRIN1Q14444 709 aaKnown RBP15.48■□□□□ 0.07
LMNA-201ENST00000347559 INPP5AQ14642 412 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 POLD3Q15054 466 aaPredicted RBP15.48■□□□□ 0.07
LMNA-201ENST00000347559 CLPPQ16740 277 aaPredicted RBP15.48■□□□□ 0.07
LMNA-201ENST00000347559 SPANXN3Q5MJ09 141 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 IQSEC1Q6DN90 963 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 HOMEZQ8IX15 550 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 PACRGLQ8N7B6 248 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 RAB2BQ8WUD1 216 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 TMEM176AQ96HP8 235 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 CTRCQ99895 268 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 NAT9Q9BTE0 207 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 IL22Q9GZX6 179 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 ADAMTS10Q9H324 1103 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 ARMC1Q9NVT9 282 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 KCNK1O00180 336 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 INPP4BO15327 924 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 XYLBO75191 536 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 NR4A2P43354 598 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 MAGEA12P43365 314 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 HLCSP50747 726 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 GRSF1Q12849 480 aaKnown RBP eCLIP15.48■□□□□ 0.07
LMNA-201ENST00000347559 CNSTQ6PJW8 725 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 CRTC3Q6UUV7 619 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 C14orf80Q86SX3 495 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 EXOC8Q8IYI6 725 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 C12orf29Q8N999 325 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 ANKRD52Q8NB46 1076 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 B3GNT5Q9BYG0 378 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 CEP44Q9C0F1 390 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 PORCNQ9H237 461 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 JPH1Q9HDC5 661 aaPredicted RBP15.48■□□□□ 0.07
LMNA-201ENST00000347559 TBC1D13Q9NVG8 400 aa15.48■□□□□ 0.07
LMNA-201ENST00000347559 ZBBXA8MT70 800 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 MTHFD1P11586 935 aaKnown RBP15.47■□□□□ 0.07
LMNA-201ENST00000347559 GOT1P17174 413 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 MAPRE1Q15691 268 aaKnown RBP15.47■□□□□ 0.07
LMNA-201ENST00000347559 CYP51A1Q16850 503 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 CYBRD1Q53TN4 286 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 XKR3Q5GH77 459 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 CCNYL2Q5T2Q4 361 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 KIAA2013Q8IYS2 634 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 ANKRD13AQ8IZ07 590 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 USP33Q8TEY7 942 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 ZFP90Q8TF47 636 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 P2RY11Q96G91 374 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 CENPNQ96H22 339 aaPredicted RBP15.47■□□□□ 0.07
LMNA-201ENST00000347559 MUS81Q96NY9 551 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 SEZ6LQ9BYH1 1024 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 LRRC40Q9H9A6 602 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 AGPAT4Q9NRZ5 378 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 TMEM181Q9P2C4 612 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 ANKRD12Q6UB98 2062 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 CAPN15O75808 1086 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 KRT75O95678 551 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 CYP3A5P20815 502 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 YWHAQP27348 245 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 RPS9P46781 194 aaKnown RBP15.47■□□□□ 0.07
LMNA-201ENST00000347559 LSM3P62310 102 aaKnown RBP15.47■□□□□ 0.07
LMNA-201ENST00000347559 SMUG1Q53HV7 270 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 CERCAMQ5T4B2 595 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 PRR23BQ6ZRT6 265 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 KCNMB4Q86W47 210 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 SLC41A1Q8IVJ1 513 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 CDAN1Q8IWY9 1227 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 SPPL2BQ8TCT7 592 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 CSPG4P5Q96PW8 444 aa15.47■□□□□ 0.07
LMNA-201ENST00000347559 FBRSL1Q9HCM7 1045 aaKnown RBP15.47■□□□□ 0.07
LMNA-201ENST00000347559 TRIM64A6NGJ6 449 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 AURKAO14965 403 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 MAN1A2O60476 641 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 PIGRP01833 764 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 APOA4P06727 396 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 NR3C2P08235 984 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 MBL2P11226 248 aaPredicted RBP15.46■□□□□ 0.07
LMNA-201ENST00000347559 YBX3P16989 372 aaKnown RBP eCLIP15.46■□□□□ 0.07
LMNA-201ENST00000347559 ALDH4A1P30038 563 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 PLK1P53350 603 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 MPP1Q00013 466 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 AQP6Q13520 282 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 CAPSQ13938 189 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 BAATQ14032 418 aaPredicted RBP15.46■□□□□ 0.07
LMNA-201ENST00000347559 PAGE2BQ5JRK9 111 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 PARP8Q8N3A8 854 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 SFRP1Q8N474 314 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 EFHD2Q96C19 240 aaPredicted RBP15.46■□□□□ 0.07
LMNA-201ENST00000347559 NXNL1Q96CM4 212 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 CHRAC1Q9NRG0 131 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 BFARQ9NZS9 450 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 KLHL3Q9UH77 587 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 TSPAN16Q9UKR8 245 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 VANGL2Q9ULK5 521 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 SYNJ2BP-COX16A0A087WUM0 186 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 NR5A2O00482 541 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 TIMM44O43615 452 aa15.46■□□□□ 0.07
LMNA-201ENST00000347559 RSL1D1O76021 490 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms