RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CD84Q9UIB8 345 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 RNF112Q9ULX5 631 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 ACTL7BQ9Y614 415 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 CDH23Q9H251 3354 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 SMAPO00193 183 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 CALB2P22676 271 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 PTPRNQ16849 979 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 PKDCCQ504Y2 493 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 LPCAT4Q643R3 524 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 IZUMO2Q6UXV1 221 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 RCN3Q96D15 328 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 MTX2O75431 263 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 DNAJC8O75937 253 aaPredicted RBP13.43□□□□□ -0.26
CASC4-202ENST00000345795 ATP5HO75947 161 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 URODP06132 367 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 ALPIP09923 528 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 CYBAP13498 195 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 SYN1P17600 705 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 TPD52P55327 224 aaPredicted RBP13.43□□□□□ -0.26
CASC4-202ENST00000345795 DBN1Q16643 649 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 YTHDF3Q7Z739 585 aaKnown RBP13.43□□□□□ -0.26
CASC4-202ENST00000345795 CLDN19Q8N6F1 224 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 LINC01465Q8N7H1 131 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 FBXO22Q8NEZ5 403 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 LRGUKQ96M69 825 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 NAT9Q9BTE0 207 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 FRMD8Q9BZ67 464 aaPredicted RBP13.43□□□□□ -0.26
CASC4-202ENST00000345795 ZNHIT2Q9UHR6 403 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 SH3BP5O60239 455 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 RASSF9O75901 435 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 XRCC4Q13426 336 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 UGP2Q16851 508 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 FSCBQ5H9T9 825 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 PCID2Q5JVF3 399 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 GRTP1Q5TC63 336 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 RNF43Q68DV7 783 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 GK5Q6ZS86 529 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 ZBTB46Q86UZ6 589 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 OR9I1Q8NGQ6 314 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 HEXDCQ8WVB3 486 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 LENG8Q96PV6 779 aaPredicted RBP13.42□□□□□ -0.26
CASC4-202ENST00000345795 PRKAG2Q9UGJ0 569 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 SRRDQ9UH36 339 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 TAGLN3Q9UI15 199 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 NCAM2O15394 837 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 KPNA6O60684 536 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 SMIM24O75264 130 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 PARNO95453 639 aaKnown RBP13.42□□□□□ -0.26
CASC4-202ENST00000345795 CCND1P24385 295 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 GABRR2P28476 465 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 BFSP2Q13515 415 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 TMEM154Q6P9G4 183 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 CDK15Q96Q40 435 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 DPYSL4O14531 572 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 LINC00032P0C843 101 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 ARSDP51689 593 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 BOP1Q14137 746 aaKnown RBP13.42□□□□□ -0.26
CASC4-202ENST00000345795 FLOT2Q14254 428 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 NRF1Q16656 503 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 PIK3R6Q5UE93 754 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 SCD5Q86SK9 330 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
CASC4-202ENST00000345795 PTGR2Q8N8N7 351 aaPredicted RBP13.42□□□□□ -0.26
CASC4-202ENST00000345795 DENND1AQ8TEH3 1009 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 ZNF296Q8WUU4 475 aaPredicted RBP13.42□□□□□ -0.26
CASC4-202ENST00000345795 ULK4Q96C45 1275 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 HPS4Q9NQG7 708 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 UBA2Q9UBT2 640 aaPredicted RBP13.42□□□□□ -0.26
CASC4-202ENST00000345795 TRHDEQ9UKU6 1024 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 PKP3Q9Y446 797 aa13.42□□□□□ -0.26
CASC4-202ENST00000345795 C2orf78A6NCI8 922 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 K7ERQ8 282 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 AGRPO00253 132 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 GSC2O15499 205 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 SIN3BO75182 1162 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 SLC2A3P11169 496 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 NRG1Q02297 640 aaPredicted RBP13.41□□□□□ -0.26
CASC4-202ENST00000345795 ZNF534Q76KX8 674 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 CEP97Q8IW35 865 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 MFN1Q8IWA4 741 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 GFM2Q969S9 779 aaKnown RBP13.41□□□□□ -0.26
CASC4-202ENST00000345795 LRRC39Q96DD0 335 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 RBBP8Q99708 897 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 TLE6Q9H808 572 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 FBRSL1Q9HCM7 1045 aaKnown RBP13.41□□□□□ -0.26
CASC4-202ENST00000345795 EGFL7Q9UHF1 273 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 EVLQ9UI08 416 aaPredicted RBP13.41□□□□□ -0.26
CASC4-202ENST00000345795 SLC12A4Q9UP95 1085 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 XIRP2A4UGR9 3374 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 SMNDC1O75940 238 aaKnown RBP eCLIP13.41□□□□□ -0.26
CASC4-202ENST00000345795 TPSB2P20231 275 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 TPSAB1Q15661 275 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 TMTC4Q5T4D3 741 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 PKN3Q6P5Z2 889 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 IYDQ6PHW0 289 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 POLR1EQ9GZS1 481 aaKnown RBP13.41□□□□□ -0.26
CASC4-202ENST00000345795 CRISPLD1Q9H336 500 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 PNMA8BQ9ULN7 279 aaPredicted RBP13.41□□□□□ -0.26
CASC4-202ENST00000345795 DCLK1O15075 740 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 SELPP16109 830 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms